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CAZyme Information: MGYG000003683_00042

You are here: Home > Sequence: MGYG000003683_00042

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium pseudocatenulatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pseudocatenulatum
CAZyme ID MGYG000003683_00042
CAZy Family GH3
CAZyme Description Exo-alpha-(1->6)-L-arabinopyranosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
748 MGYG000003683_1|CGC2 81230.37 4.4123
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003683 2206268 Isolate China Asia
Gene Location Start: 57046;  End: 59292  Strand: +

Full Sequence      Download help

MSESTYPSVN  DLTLEEKASL  TSGGDAWHLQ  GVEAKGIPGY  MITDGPHGLR  KSNSATTGEV60
DLNNCVPATC  FPPAAGLSSS  WNPELIHQVG  EAMAEECIQE  KVAVILGPGV  NIKRNPLGGR120
CFEYWSEDPY  LAGHEAIGIV  AGVQSKGVGT  SLKHFAANNQ  ETDRLRISAN  ISQRALREIY180
FPAFEHIVKE  AQPWTIMCAY  NCINGVHAAQ  DHWLLTDVLR  DEWGFQGIVM  SDWGADHDRV240
ASLNAGLNLE  MPPSYTDDQI  VYAARDGRIQ  PAQLDRMAQG  MIDLVNKTRA  AMSIEGYRFD300
IEAHDEVAHR  AAIESMVLLK  NDDAILPVAN  DAKVTVIGEF  ARTPRYQGGG  SSHITPTKMT360
SFLDTLTERG  VDAKFAPGFT  LDLEPADPAL  EAEAVDAAKG  ADVVLMFLGL  PEAAESEGFD420
RETLDMPAKQ  IALLEAVAAE  NKNVVVVLSN  GSVVTVAPWA  KNAKGILESW  LLGQSGGPAL480
ADVLFGKVSP  SGKLAQTIPF  DINDDPSTIN  WPGEEGHVDY  GEGVFVGYRY  YDTYNKAVDY540
PFGFGLSYAT  FEVSDVKAVK  TGACTASVSA  VVKNTSNVDA  AETVQVYVAP  GKADVVRPKH600
ELKGFKKVFL  KAGESAEVSF  ELDDRAFAYW  SERFNDWHVE  SGEYTIEVGT  SSRDIAGSAV660
VELDGDGKAQ  PLTEWSNFME  WREDPLGSKV  LEILRAEGEA  GRMPVVPDND  MTRLFLDSMP720
INSMSVLMGA  DGKQIFEYML  EKYAELTK748

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.37 3.2.1.23 3.2.1.-

CAZyme Signature Domains help

Created with Snap377411214918722426129933637441144848652356159863567371032252GH3
Family Start End Evalue family coverage
GH3 32 252 9.7e-66 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap377411214918722426129933637441144848652356159863567371069655PRK15098316528Glyco_hydro_3_C24341BglX9623PLN0308068275Glyco_hydro_3
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 6.02e-100 69 655 118 757
beta-glucosidase BglX.
pfam01915 Glyco_hydro_3_C 1.77e-73 316 528 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
COG1472 BglX 2.65e-60 24 341 47 364
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 4.91e-59 9 623 57 743
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 2.57e-38 68 275 85 307
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Created with Snap37741121491872242612993363744114484865235615986356737101748AFS33104.1|GH31748QTL81268.1|GH31748AZN75174.1|GH31748QGM63169.1|GH31748BAR02261.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AFS33104.1 0.0 1 748 1 748
QTL81268.1 0.0 1 748 1 748
AZN75174.1 0.0 1 748 1 748
QGM63169.1 0.0 1 748 1 748
BAR02261.1 0.0 1 748 1 748

PDB Hits      download full data without filtering help

Created with Snap377411214918722426129933637441144848652356159863567371017485WAB_A97457MS2_A96712X40_A96712X42_A96553AC0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WAB_A 0.0 1 748 1 748
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]
7MS2_A 5.90e-219 9 745 9 749
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
2X40_A 6.10e-128 9 671 8 721
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
2X42_A 9.30e-127 9 671 8 721
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
3AC0_A 1.55e-115 9 655 10 828
Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap37741121491872242612993363744114484865235615986356737101748sp|F6C6C1|APY_BIFBA1748sp|E7CY69|APY_BIFLN9745sp|P14002|BGLB_ACET29662sp|A7LXS8|BGH3A_BACO19662sp|Q0CAF5|BGLI_ASPTN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
F6C6C1 0.0 1 748 1 757
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1
E7CY69 0.0 1 748 1 757
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1
P14002 2.28e-218 9 745 9 749
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2
A7LXS8 4.68e-123 9 662 50 744
Beta-glucosidase BoGH3A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02644 PE=1 SV=1
Q0CAF5 1.43e-120 9 662 10 831
Probable beta-glucosidase I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bglI PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.924024 0.075400 0.000215 0.000125 0.000089 0.000169

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003683_00042.