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CAZyme Information: MGYG000003683_01158

You are here: Home > Sequence: MGYG000003683_01158

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium pseudocatenulatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pseudocatenulatum
CAZyme ID MGYG000003683_01158
CAZy Family GH8
CAZyme Description Reducing end xylose-releasing exo-oligoxylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 MGYG000003683_2|CGC6 43786.37 4.5756
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003683 2206268 Isolate China Asia
Gene Location Start: 403004;  End: 404143  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.156 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 54 371 1.4e-75 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 9.54e-66 52 378 40 350
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
pfam01270 Glyco_hydro_8 2.39e-12 55 297 22 254
Glycosyl hydrolases family 8.
PRK11097 PRK11097 3.03e-07 55 158 42 146
cellulase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHB62095.1 4.09e-301 1 379 1 379
BAR02996.1 1.67e-300 1 379 1 379
BAF39081.1 1.67e-300 1 379 1 379
AAO67498.1 1.67e-300 1 379 1 379
AZN74264.1 9.64e-300 1 379 1 379

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1WU4_A 1.54e-143 14 377 16 377
ChainA, xylanase Y [Halalkalibacterium halodurans C-125],1WU5_A Chain A, xylanase Y [Halalkalibacterium halodurans C-125]
3A3V_A 6.23e-143 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans]
2DRR_A 8.84e-143 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
2DRS_A 1.25e-142 14 377 16 377
ChainA, Xylanase Y [Halalkalibacterium halodurans C-125]
1WU6_A 1.25e-142 14 377 16 377
ChainA, xylanase Y [Halalkalibacterium halodurans C-125]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1A048 3.33e-301 1 379 1 379
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
Q9KB30 6.43e-143 14 377 16 377
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A0A0S2UQQ5 4.01e-127 14 377 16 378
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
P37701 3.97e-12 60 376 93 389
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
A3DC29 3.03e-09 60 309 89 330
Endoglucanase A OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003683_01158.