CAZyme Information: MGYG000003683_01314

Basic Information

• Species: Bifidobacterium pseudocatenulatum
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pseudocatenulatum
• CAZyme ID: MGYG000003683_01314
• CAZy Family: GH146
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
853	MGYG000003683_2|CGC7	94191.91	4.6055

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003683	2206268	Isolate	China	Asia

• Gene Location: Start: 588214; End: 590775 Strand: -

Full Sequence      

MTSHILERVPLQQVRLLPGEHFDAQQAGARYLLDLDVDRLLYPFRREAGLPQPTDADGNP
VTSYPNWEETGLDGHIAGHYLSACVGFAQVADDPQPFIDRAATVVRSWHECQQSFAGDAV
MRGYVGGVPDSRTVFGRLAAGDVESQNFSMNDAWVPMYNVHKTFAGLLDTWADFASIDEQ
TSQLARTVVLDLADWWCRIAEPLDDETFDRILVSEFGGMCESFAELYARTGEERYHVMAD
RFKDHAIFDPLAQGEDVLTGMHANTQIPKVLGWERLGAICNDEQADAATNTFWDSVVHHR
SVSIGAHSVSEHFHPTDDFSSMIESREGPETCNSYNMSKLAERLWLRSGSADYINFYERV
LENHLLSTINPKQPGFVYFTPMRSQHYRAYSTPQECFWCCVGSGLENHARYGRLIYALQR
PAAQDSADSAAAGFASSAAETGNTVSNNAEAEATRLLVNLYIDSTFDCPEQGLRITQRAA
RIEDGVDYTVTFTLESTAEHVPGTPGGLRETTLFLRRPWWAEHYGVMEATCAVCTLDPAR
TNDIPEGYLPLRLRWNGVAEVVMRLRPRITVERMPDGSPWVSFMKGPKVMALASDSDDMD
GEFADAGRMSHIATGPLRPLVSMPIINGNPVKACAQVSRPYVHGLTVAATDVSGRTMLFD
MHAFSSMHGCRYSVYLPVADDGNVCALRAQLADIDARQAASEQTVVDTIACGQQQSEVDH
RYSGDNDMMGADGTLHWRRALAGGEFQYAMRGRGQAHRLEIEVIADSAESDGENAAYEVT
LDGLPLQRGEHRRIDGDPTAIDVYPLPDAIETAETAENIENTGENDNADDAAIVRISASA
HDGAKITALRLHK

Enzyme Prediction     

EC	3.2.1.185

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH146	13	591	3.2e-181	0.9980119284294234

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	1.56e-113	13	591	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.48e-67	63	598	54	508	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam16375	DUF4986	1.12e-13	596	675	2	83	Domain of unknown function. This family around 150 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides and Bacillus species. The function of this family remains unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTL81734.1	0.0	1	853	1	853
AZN74132.1	0.0	1	853	1	853
BAR02842.1	0.0	1	853	1	853
QGM61683.1	2.05e-291	6	809	5	811
AIZ15384.1	2.90e-291	6	809	5	811

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YQH_AAA	6.93e-152	2	763	21	733	ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A	1.49e-146	2	763	21	733	Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000060	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003683_01314.