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CAZyme Information: MGYG000003687_00178

You are here: Home > Sequence: MGYG000003687_00178

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus polymyxa
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa
CAZyme ID MGYG000003687_00178
CAZy Family CBM22
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
571 MGYG000003687_1|CGC4 64040.69 5.0922
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003687 5656034 Isolate China Asia
Gene Location Start: 164603;  End: 166318  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 233 558 4.5e-110 0.9867986798679867
CBM22 77 204 1.6e-33 0.9541984732824428

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 3.79e-127 235 558 4 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 2.55e-120 272 556 1 263
Glycosyl hydrolase family 10.
COG3693 XynA 1.15e-104 256 558 51 339
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 4.42e-23 78 207 8 134
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam13385 Laminin_G_3 4.84e-04 124 201 7 97
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS29167.1 0.0 1 571 137 707
QPK52918.1 0.0 1 571 137 707
QPK57998.1 0.0 1 571 137 707
QDA27140.1 0.0 1 571 137 707
AHM68511.1 0.0 1 569 137 705

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2DEP_A 4.83e-135 225 565 1 349
CrystalStructure of xylanase B from Clostridium stercorarium F9 [Thermoclostridium stercorarium],2DEP_B Crystal Structure of xylanase B from Clostridium stercorarium F9 [Thermoclostridium stercorarium]
6FHF_A 2.14e-121 230 558 16 360
Highlyactive enzymes by automated modular backbone assembly and sequence design [Escherichia coli]
2UWF_A 9.90e-121 229 558 8 350
ChainA, ALKALINE ACTIVE ENDOXYLANASE [Halalkalibacterium halodurans]
6LPS_A 3.34e-120 229 558 9 351
ChainA, Beta-xylanase [Halalkalibacterium halodurans]
7CPK_A 1.15e-117 229 558 10 352
XylanaseR from Bacillus sp. TAR-1 [Bacillus sp. TAR1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40942 3.58e-129 227 562 42 385
Thermostable celloxylanase OS=Thermoclostridium stercorarium OX=1510 GN=xynB PE=1 SV=1
P36917 1.10e-118 15 561 138 677
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1
O69230 1.66e-118 1 571 120 719
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1
P07528 2.07e-116 229 558 54 396
Endo-1,4-beta-xylanase A OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=xynA PE=1 SV=1
Q60037 2.38e-113 43 570 177 703
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003687_00178.