logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003687_01892

You are here: Home > Sequence: MGYG000003687_01892

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus polymyxa
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa
CAZyme ID MGYG000003687_01892
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1105 121235.38 5.2513
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003687 5656034 Isolate China Asia
Gene Location Start: 182916;  End: 186233  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003687_01892.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 812 1096 2.1e-102 0.9895833333333334
PL1 108 290 3.4e-74 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 6.09e-81 811 1103 6 304
pectinesterase
PLN02682 PLN02682 4.91e-75 810 1101 70 366
pectinesterase family protein
pfam01095 Pectinesterase 5.99e-71 812 1097 2 297
Pectinesterase.
PLN02432 PLN02432 2.51e-67 802 1099 2 290
putative pectinesterase
PLN02665 PLN02665 7.69e-65 778 1089 33 348
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIY08738.1 0.0 1 1105 1 1105
AHM68033.1 0.0 1 1105 1 1105
QDA27571.1 0.0 1 1105 1 1105
QPK53353.1 0.0 1 1105 1 1105
QPK58436.1 0.0 1 1105 1 1105

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 4.45e-46 812 1097 9 304
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 3.61e-45 813 1097 6 300
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 6.03e-36 813 1094 34 357
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 1.05e-34 822 1095 18 334
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1E_A 3.64e-31 822 1074 19 271
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 1.60e-60 812 1089 7 290
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9ZQA3 2.39e-56 812 1101 91 384
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1
Q8VYZ3 1.11e-55 821 1099 95 379
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9FM79 8.93e-51 812 1101 82 377
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q1JPL7 4.49e-48 812 1097 247 542
Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana OX=3702 GN=PME18 PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000420 0.608213 0.390704 0.000265 0.000207 0.000171

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003687_01892.