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CAZyme Information: MGYG000003687_02756

You are here: Home > Sequence: MGYG000003687_02756

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus polymyxa
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus polymyxa
CAZyme ID MGYG000003687_02756
CAZy Family GT51
CAZyme Description Monofunctional biosynthetic peptidoglycan transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
841 MGYG000003687_11|CGC1 94222.99 9.1216
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003687 5656034 Isolate China Asia
Gene Location Start: 1920;  End: 4445  Strand: +

Full Sequence      Download help

MNPKRRPSSQ  KRSRWRIFGR  VLLINIKWFS  LAGVLGVLFA  GGLISGYVAA  LVHDEPVRSR60
QLIYEKVNEN  ALTSFVFFND  QVTPVGRMRM  EEDRQLVDLK  DVPQSIVDAL  ISTEDSQFYE120
HHGVDLKGTA  RAVKQKLLNE  NRQTGGSTLT  QQVARRVFLS  LDKTDSRKVK  EMLLALRMER180
FMGKDKILTA  YLNKMPFGNG  SAGYNLYGIK  SASLGIFNVS  DLHKLHIAQA  AYLAGLPQLP240
SVYSAFDGKG  NFDEEGFNKA  MERQRVVLGR  MLETGKLTLS  EYNDALQFDV  RATLAPHREK300
SYNTFPYLML  ETEREAAQLL  ALQQNPNLTA  AEISKPEHAE  LLQNTREELQ  RSGYRIYTTI360
NKKIYSNMRQ  IAANPQNFSP  YSKKKGLEQI  AAIMIDHKTG  AILGMIEGRD  FNTEQMNYAT420
QMTRQPGSAM  KPIAAYLPAL  EKGYTQPAGL  IDDSQIILKD  GRKGYHIPKN  YNRRYEGLMT480
AREALNRSIN  IPALRLFLYE  VKIPNAWNFV  RSLGITTIQP  QDEHAQTGVL  GGLSKGVSVE540
ELTAAYGTIP  NMGVYNAPHL  ISKITDANGK  IVYEFKPQTK  RVYSQQTAFL  MTDMLRTVIS600
DPRGTGKRLQ  KAFKNYGTID  IAGKTGTTQN  FGDVWFMGYT  PDITLGVWAG  YRQQVNTLSQ660
EGHTRAQSVW  ALIMNEAVKD  QPELFKNKHF  IQPEGVVKVT  VSSLTGKLPG  RYSRQSGHLV720
TDWFNQKYVP  TEVGREQLPR  SARPVVPSKP  DIKKEDVPEI  KVPATDQEEV  PPEETVPSVP780
DTDAEIEPPD  ENNDVPSTDT  SQPSIENVPE  TPSESENQSG  APKTQPNEVI  DPEPTTDQSN840
N841

Enzyme Prediction      help

No EC number prediction in MGYG000003687_02756.

CAZyme Signature Domains help

Created with Snap428412616821025229433637842046250454658863067271475679886271GT51
Family Start End Evalue family coverage
GT51 86 271 2e-54 0.96045197740113

CDD Domains      download full data without filtering help

Created with Snap428412616821025229433637842046250454658863067271475679811699MrcB93680PBP_1a_fam26709MrcA74709PbpC80706PBP_1b
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0744 MrcB 2.44e-164 11 699 1 618
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
TIGR02074 PBP_1a_fam 2.05e-157 93 680 1 531
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG5009 MrcA 3.16e-132 26 709 5 746
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis].
COG4953 PbpC 7.74e-80 74 709 36 593
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis].
TIGR02071 PBP_1b 6.02e-78 80 706 121 705
penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]

CAZyme Hits      help

Created with Snap42841261682102522943363784204625045465886306727147567981841QPK59519.1|GT511841AIY07608.1|GT511841AHM66697.1|GT511841QPK54426.1|GT511841AZH30115.1|GT51
Hit ID E-Value Query Start Query End Hit Start Hit End
QPK59519.1 0.0 1 841 1 841
AIY07608.1 0.0 1 841 1 841
AHM66697.1 0.0 1 841 1 841
QPK54426.1 0.0 1 841 1 841
AZH30115.1 0.0 1 841 1 841

PDB Hits      download full data without filtering help

Created with Snap4284126168210252294336378420462504546588630672714756798427302JE5_A667087U4H_A977093DWK_A977092OLU_A1786813ZG8_B
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2JE5_A 3.48e-92 42 730 3 693
StructuralAnd Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6],2JE5_B Structural And Mechanistic Basis Of Penicillin Binding Protein Inhibition By Lactivicins [Streptococcus pneumoniae R6]
7U4H_A 1.18e-69 66 708 12 788
ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]
3DWK_A 2.85e-63 97 709 30 607
ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL]
2OLU_A 3.47e-60 97 709 39 616
StructuralInsight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Apoenzyme [Staphylococcus aureus],2OLV_A Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus],2OLV_B Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex [Staphylococcus aureus]
3ZG8_B 6.69e-60 178 681 3 464
CrystalStructure of Penicillin Binding Protein 4 from Listeria monocytogenes in the Ampicillin bound form [Listeria monocytogenes],3ZG9_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Cefuroxime bound form [Listeria monocytogenes],3ZGA_B Crystal Structure of Penicillin-Binding Protein 4 from Listeria monocytogenes in the Carbenicillin bound form [Listeria monocytogenes]

Swiss-Prot Hits      download full data without filtering help

Created with Snap428412616821025229433637842046250454658863067271475679821651sp|P38050|PBPF_BACSU38732sp|A5I6G4|PBPA_CLOBH38732sp|A7FY32|PBPA_CLOB138732sp|A7GHV1|PBPA_CLOBL26732sp|Q0TNZ8|PBPA_CLOP1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38050 1.54e-78 21 651 14 570
Penicillin-binding protein 1F OS=Bacillus subtilis (strain 168) OX=224308 GN=pbpF PE=2 SV=2
A5I6G4 5.10e-78 38 732 25 697
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=pbpA PE=3 SV=1
A7FY32 5.10e-78 38 732 25 697
Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=pbpA PE=3 SV=1
A7GHV1 1.20e-76 38 732 25 697
Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=pbpA PE=3 SV=1
Q0TNZ8 2.40e-76 26 732 28 719
Penicillin-binding protein 1A OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=pbpA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999852 0.000149 0.000001 0.000000 0.000000 0.000024

TMHMM  Annotations      download full data without filtering help

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