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CAZyme Information: MGYG000003688_00606

You are here: Home > Sequence: MGYG000003688_00606

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003437035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003437035
CAZyme ID MGYG000003688_00606
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1187 MGYG000003688_2|CGC3 125311.74 4.593
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003688 2305632 Isolate China Asia
Gene Location Start: 250527;  End: 254090  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003688_00606.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 259 403 1.3e-23 0.723404255319149
CBM13 527 667 1.2e-19 0.6436170212765957
CBM13 899 997 1.2e-19 0.5053191489361702
CBM13 431 554 2e-19 0.6063829787234043
CBM13 785 898 7.5e-18 0.5638297872340425

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 8.28e-21 455 545 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam13529 Peptidase_C39_2 2.85e-20 1006 1159 2 138
Peptidase_C39 like family.
pfam14200 RicinB_lectin_2 5.68e-20 892 980 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.65e-18 296 383 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.14e-17 611 688 2 79
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT49575.1 7.25e-175 404 1187 270 1061
BAK44091.1 7.63e-63 248 997 131 885
QRT49576.1 7.68e-40 403 914 412 928
QOL34941.1 1.92e-26 102 471 614 982
BAR06175.1 3.13e-19 86 469 539 916

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34735 7.27e-07 1001 1187 59 249
Uncharacterized protein YvpB OS=Bacillus subtilis (strain 168) OX=224308 GN=yvpB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004389 0.993304 0.001464 0.000318 0.000244 0.000242

TMHMM  Annotations      download full data without filtering help

start end
13 35