CAZyme Information: MGYG000003696_00729

Basic Information

• Species: Collinsella sp003436275
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
• CAZyme ID: MGYG000003696_00729
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1804	MGYG000003696_3|CGC2	193120.87	4.5695

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003696	2284579	Isolate	China	Asia

• Gene Location: Start: 125349; End: 130763 Strand: +

Full Sequence      

MLKKRYLVAAVFAVAGFLGLSAPPAALAAGYGNVVVNESNGNVTIGNNAISRTFSTAAGK
LKTVEINNKLASTTLVPGSGSEEFVIQSLAEATRLEPAGALTSVRPTAVTVTGSSVDTSE
AALASKAIDEDAGTYWASSAEAAGTANLIVDFGGTKTIASVSYTPRHHESVGYNCTGRVK
TYKLEYQMADGTWATLVENGTMNDTGTTVIKFAAVQGKAVRLTGLTTYHWQPSNENKYMN
VAELDVLDASDNSVVHGSKGWTVTGTSVATNEGGGYEALVDGDFTTYYHSRYGAGEGDTK
KLPVDLTIDRGEGAKSSFQTVGYAGRNVKGANGTFKKFAVYVSDSKDGLFDDSNKKGTFS
VDLSSSYNDDGTCKMTYFGLDKVQTGRYVGIRVLEAWGGSFASGAELDLYQEKFDTFENA
SGKPQLKTSNLELDGPVQVSDTTATINDVEKSGKMLTFTFKPVQFGNGLATVTEKVVMYD
DDHFMRKFLEVNSGDKDIRFNYIDGEHLNVKDASYTWTIPTGKGGVVEMTEARANLGQPI
YVNGLFLGSEFPETDTQIVDDLGRMRYWTGKNFTDFERDGQLTSDGKYVSWQTVVGATHS
DGSNNDVVRTDFYSYIKGISKPSEFRIQYNSWFDNMMLIDENNILDSFKAVDKNLSSTGV
RPLDSYVVDDGWNNYNNTEASVDPGRSGTGKNTDGFWTFNSKFPNKLTTSSSLVEKLGSN
FGVWVGPRGGYNFYGQLADIISKAGNGSAAGGSIDVADQRYVDNFQNLALQWMADYGVNY
WKWDGYADNAQYNAFSQGEGVVGYDENHHHMYGGPNGFYHATDLWEKWIVLFENVWDKAD
DLGIDNLWVSLTCYVNPSPWFLQWSNSVWIQCTHDRGEVSNSTLNNKMDNMLSYRDGAYY
DFVKNHDFQFPLSNLYNHDPIYGKEGTGISANSMNGAQFRNYLYMMATRGTSFWELYYSD
SLLDDEKYLVNADFLEWAETNFDKLQNAKMIGGVPASGVKLGGISGAGTQDAYGFACFNS
KGDEGIISMRNPSASEKTITFKLDAGVGASHAGTFKRSIVESYTSDGSALGASKDSYAQG
DTVAVALKPGETQIWNLSQKGDTEAPKLDTMYVKGVKSLRVQASKHVTNAQFTVTVDGKQ
VECENVEASADMRTFDIKLKNGVKNGSKIEVAAAQGQDACGNSLEGSVSGIYHKDGVIAS
AATSAGGELSDAENSVEGKNGFTVATNVSDAAASTALLSQGDEWKLGIDNDGKAYFTVNG
TTATSDVTVAGGSVTVAGVRENNGMLKIYVDGELAGSAYLGENNADHAVSTGAITAGGGA
KQSSLAVYDHALGYDEVPTSALAELIETVEAKKDQVSDASWANADMDNLIDQAKAALKGD
AAAKKTAYDNLYAGYLKLVPANKTVNLALGKVPTAAWVDGDTTTPVTNSDASRALTVATD
GNNADTNGYCIFGNDGKEAGSYMQVDLGSDYEITGVNLWRYWADSRTYKATALVVASKSD
FSDAQVLYYSGDSDVFGLGEDPKDSLYAETAEGKQLFDASGSTAATTARYVRLYASGVKG
TGVSKENHVVELQVFGVTKQNDPYGLNGENGLLSLIARAETAQKNADSYESVEGLTDPLK
RAHDVIDRINAGQDVTYGEVKDAAEALKAALDALVVKAPAKKVTVTFDDGCGNKSTVELN
EGGKLAKPADPTREGYDFAGWCTDKDGEHTFDFDSAVNADITLYAKWNKQQSGGSGSGSE
GGSGSGGASTDKDSTGSQNKGDKKGTKADLPGTGDSSMFFAGLAFCLGAAVIAASRLLKR
RSER

Enzyme Prediction     

No EC number prediction in MGYG000003696_00729.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	115	244	8.8e-19	0.8951612903225806

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam09479	Flg_new	1.39e-14	1664	1726	2	65	Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.
pfam00754	F5_F8_type_C	1.21e-13	110	244	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam13385	Laminin_G_3	2.30e-08	1220	1337	17	150	Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
TIGR02543	List_Bact_rpt	2.62e-06	1691	1729	1	41	Listeria/Bacterioides repeat. This model describes a conserved core region, about 43 residues in length, of at least two families of tandem repeats. These include 78-residue repeats from 2 to 15 in number, in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few bacteria. [Unknown function, General]
cd14791	GH36	1.12e-05	627	812	4	182	glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCC62414.1	0.0	259	1735	28	1571
QQA11075.1	6.84e-181	236	1299	92	1166
BAB80970.1	9.46e-181	245	1299	110	1166
AOY54034.1	2.50e-180	236	1299	92	1166
ABG83191.1	4.78e-180	236	1299	92	1166

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7Q1W_A	1.32e-07	1460	1634	69	271	ChainA, Ruminococcus gnavus end galactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
7Q20_A	1.32e-07	1460	1634	70	272	ChainA, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149],7Q20_G Chain G, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
7PMO_D	1.33e-07	1460	1634	70	272	ChainD, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149],7PMO_G Chain G, Ruminococcus gnavus endogalactosidase GH98 [[Ruminococcus] gnavus ATCC 29149]
2Y5P_A	6.25e-06	1664	1725	6	68	B-repeatof Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_B B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_C B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_D B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000339	0.998823	0.000195	0.000224	0.000206	0.000182

TMHMM  Annotations     

start	end
7	29
1776	1798