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CAZyme Information: MGYG000003697_02117

You are here: Home > Sequence: MGYG000003697_02117

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella copri_A
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella copri_A
CAZyme ID MGYG000003697_02117
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
470 MGYG000003697_25|CGC2 52846.27 8.15
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003697 3899884 Isolate China Asia
Gene Location Start: 38469;  End: 39881  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003697_02117.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 185 436 1e-27 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02218 PLN02218 2.20e-05 219 435 206 410
polygalacturonase ADPG
PLN02793 PLN02793 5.73e-04 254 405 228 367
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR65187.1 2.53e-189 17 470 22 477
QJR73783.1 2.53e-189 17 470 22 477
QJR69450.1 2.53e-189 17 470 22 477
QEW35608.1 5.09e-189 17 470 22 477
AII64697.1 1.22e-187 2 470 7 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.673203 0.311788 0.012798 0.001232 0.000363 0.000620

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003697_02117.