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CAZyme Information: MGYG000003711_01551

You are here: Home > Sequence: MGYG000003711_01551

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas maltophilia_AQ
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia_AQ
CAZyme ID MGYG000003711_01551
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
566 MGYG000003711_30|CGC1 61758.85 7.8157
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003711 4541486 MAG Estonia Europe
Gene Location Start: 28134;  End: 29834  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003711_01551.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4254 COG4254 4.13e-31 43 410 1 339
Uncharacterized conserved protein, contains LysM and FecR domains [General function prediction only].
pfam04773 FecR 6.04e-17 139 243 1 96
FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.
NF033165 lipo_LipL45 7.68e-12 103 244 37 173
lipoprotein LipL45. Members of this family are lipoprotein LipL45, as described in Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 but found broadly in the genus Leptospira. Close homologs that are not lipoproteins by sequence are likely defective in their reported coding region.
cd00118 LysM 1.65e-07 50 94 3 44
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
pfam01476 LysM 2.75e-06 50 96 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGL77214.1 0.0 1 566 1 566
BBO52590.1 0.0 16 566 1 551
ALA87433.1 0.0 1 566 1 566
QHE22006.1 0.0 1 566 1 566
ALA91389.1 0.0 1 566 1 566

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02388 1.73e-06 284 534 513 762
Collagen alpha-1(VII) chain OS=Homo sapiens OX=9606 GN=COL7A1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.127490 0.860068 0.010918 0.000750 0.000393 0.000354

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003711_01551.