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CAZyme Information: MGYG000003712_00657
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Serratia liquefaciens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Serratia; Serratia liquefaciens | |||||||||||
| CAZyme ID | MGYG000003712_00657 | |||||||||||
| CAZy Family | GT99 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21239; End: 24658 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT99 | 3 | 376 | 6.5e-153 | 0.9947089947089947 |
| GT102 | 616 | 874 | 3.5e-99 | 0.9883268482490273 |
| GT103 | 920 | 1131 | 5.3e-88 | 0.9906103286384976 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd16438 | beta_Kdo_transferase_KpsS_like | 1.32e-07 | 143 | 336 | 16 | 224 | beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsS like. KpsS is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria. |
| cd16436 | beta_Kdo_transferase | 2.32e-07 | 143 | 340 | 15 | 204 | beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. KpsC and KpsS are retaining beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferases. They are part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria. |
| COG0438 | RfaB | 5.38e-06 | 739 | 894 | 223 | 374 | Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]. |
| COG3551 | COG3551 | 2.86e-05 | 391 | 528 | 283 | 397 | Uncharacterized protein [Function unknown]. |
| pfam13524 | Glyco_trans_1_2 | 1.08e-04 | 800 | 881 | 1 | 83 | Glycosyl transferases group 1. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIC86318.1 | 0.0 | 1 | 1139 | 1 | 1139 |
| QDI13108.1 | 0.0 | 1 | 1134 | 1 | 1122 |
| QDI22850.1 | 0.0 | 1 | 1134 | 1 | 1122 |
| QHI77444.1 | 0.0 | 1 | 1134 | 1 | 1122 |
| AGO54462.1 | 0.0 | 1 | 1135 | 1 | 1147 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5FA1_A | 1.36e-127 | 3 | 402 | 4 | 405 | ChainA, Putative N-acetyl glucosaminyl transferase [Raoultella terrigena],5FA1_B Chain B, Putative N-acetyl glucosaminyl transferase [Raoultella terrigena] |
| 5FA0_A | 1.51e-125 | 3 | 402 | 4 | 405 | ChainA, Putative N-acetyl glucosaminyl transferase [Raoultella terrigena],5FA0_B Chain B, Putative N-acetyl glucosaminyl transferase [Raoultella terrigena] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.995727 | 0.004259 | 0.000032 | 0.000006 | 0.000004 | 0.000008 |