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CAZyme Information: MGYG000003713_00090
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Campylobacter_B sp900539505 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Campylobacteraceae; Campylobacter_B; Campylobacter_B sp900539505 | |||||||||||
| CAZyme ID | MGYG000003713_00090 | |||||||||||
| CAZy Family | GT66 | |||||||||||
| CAZyme Description | Undecaprenyl-diphosphooligosaccharide--protein glycotransferase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 97028; End: 99208 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT66 | 19 | 613 | 2e-89 | 0.9105339105339105 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02516 | STT3 | 5.34e-40 | 16 | 487 | 3 | 477 | Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. |
| COG1287 | Stt3 | 8.31e-39 | 64 | 663 | 72 | 691 | Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]. |
| pfam18527 | STT3_PglB_C | 8.07e-08 | 632 | 686 | 24 | 79 | STT3/PglB C-terminal beta-barrel domain. Asparagine-linked glycosylation is a post-translational modification of proteins containing the conserved sequence motif Asn-X-Ser/Thr. The attachment of oligosaccharides is implicated in diverse processes such as protein folding and quality control, organism development or host-pathogen interactions. The reaction is catalysed by oligosaccharyltransferase (OST), a membrane protein complex located in the endoplasmic reticulum. The central, catalytic enzyme of OST is the STT3 subunit, which has homologues in bacteria and archaea. Structural analysis of a bacterial OST, undecaprenyl-diphosphooligosaccharide protein glycotransferase EC:2.4.99.19 (PglB) protein, revealed two domains: a transmembrane domain and a periplasmic domain. This entry represents the C-terminal periplasmic beta-barrel domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AKT93306.1 | 0.0 | 1 | 726 | 1 | 726 |
| EAU00940.1 | 2.27e-273 | 7 | 726 | 8 | 713 |
| QKF60717.1 | 8.55e-271 | 12 | 726 | 12 | 713 |
| QCD52086.1 | 1.03e-202 | 17 | 726 | 19 | 706 |
| QPI03445.1 | 5.00e-187 | 16 | 724 | 10 | 706 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3RCE_A | 1.96e-142 | 18 | 726 | 18 | 712 | Bacterialoligosaccharyltransferase PglB [Campylobacter lari] |
| 5OGL_A | 5.33e-139 | 18 | 726 | 18 | 712 | Structureof bacterial oligosaccharyltransferase PglB in complex with an acceptor peptide and an lipid-linked oligosaccharide analog [Campylobacter lari RM2100] |
| 6GXC_A | 7.30e-139 | 18 | 726 | 18 | 712 | Bacterialoligosaccharyltransferase PglB in complex with an inhibitory peptide and a reactive lipid-linked oligosaccharide analog [Campylobacter lari RM2100] |
| 3AAG_A | 1.20e-33 | 440 | 724 | 7 | 289 | Crystalstructure of C. jejuni pglb C-terminal domain [Campylobacter jejuni RM1221],3AAG_B Crystal structure of C. jejuni pglb C-terminal domain [Campylobacter jejuni RM1221] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q0P9C8 | 5.46e-149 | 16 | 724 | 14 | 711 | Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=pglB PE=1 SV=1 |
| Q5HTX9 | 7.70e-149 | 16 | 724 | 14 | 711 | Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter jejuni (strain RM1221) OX=195099 GN=pglB PE=1 SV=1 |
| B9KDD4 | 2.12e-141 | 18 | 726 | 18 | 712 | Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) OX=306263 GN=pglB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.903734 | 0.024475 | 0.055193 | 0.000073 | 0.000064 | 0.016488 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 16 | 38 |
| 98 | 120 |
| 127 | 149 |
| 195 | 217 |
| 224 | 242 |
| 247 | 266 |
| 279 | 301 |
| 343 | 360 |
| 365 | 382 |
| 387 | 409 |
| 416 | 435 |