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CAZyme Information: MGYG000003728_01412
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Sodaliphilus; | |||||||||||
| CAZyme ID | MGYG000003728_01412 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Beta-hexosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3492; End: 6497 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 105 | 328 | 4.9e-54 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG1472 | BglX | 9.89e-82 | 50 | 425 | 1 | 361 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam00933 | Glyco_hydro_3 | 1.35e-73 | 51 | 362 | 1 | 315 | Glycosyl hydrolase family 3 N terminal domain. |
| PRK03642 | PRK03642 | 3.22e-55 | 580 | 981 | 30 | 408 | putative periplasmic esterase; Provisional |
| pfam00144 | Beta-lactamase | 1.19e-45 | 593 | 980 | 1 | 316 | Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. |
| PRK05337 | PRK05337 | 9.46e-44 | 84 | 328 | 26 | 279 | beta-hexosaminidase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHF12964.1 | 2.07e-290 | 5 | 1001 | 2 | 989 |
| QCD35538.1 | 5.48e-290 | 27 | 999 | 26 | 989 |
| BCI64113.1 | 4.03e-288 | 5 | 999 | 2 | 993 |
| QCY58561.1 | 3.24e-280 | 11 | 999 | 6 | 991 |
| QUT55768.1 | 1.30e-279 | 11 | 999 | 6 | 991 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3BMX_A | 1.83e-54 | 32 | 557 | 26 | 619 | Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis] |
| 3LK6_A | 7.33e-54 | 35 | 557 | 3 | 593 | ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis] |
| 4GYJ_A | 9.11e-54 | 32 | 557 | 30 | 623 | Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168] |
| 6K5J_A | 2.58e-53 | 48 | 552 | 9 | 528 | Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae] |
| 3SQL_A | 6.47e-45 | 84 | 372 | 58 | 354 | CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40406 | 1.00e-53 | 32 | 557 | 26 | 619 | Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1 |
| Q5PCQ2 | 1.08e-45 | 580 | 980 | 30 | 403 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) OX=295319 GN=yfeW PE=3 SV=1 |
| B5BB26 | 1.08e-45 | 580 | 980 | 30 | 403 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella paratyphi A (strain AKU_12601) OX=554290 GN=yfeW PE=3 SV=1 |
| B4TR50 | 1.08e-45 | 580 | 980 | 30 | 403 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=yfeW PE=3 SV=1 |
| Q8Z4S7 | 1.08e-45 | 580 | 980 | 30 | 403 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella typhi OX=90370 GN=yfeW PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000262 | 0.999125 | 0.000162 | 0.000151 | 0.000142 | 0.000138 |
