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CAZyme Information: MGYG000003733_04963
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bradyrhizobium sp003020075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Bradyrhizobium; Bradyrhizobium sp003020075 | |||||||||||
| CAZyme ID | MGYG000003733_04963 | |||||||||||
| CAZy Family | AA2 | |||||||||||
| CAZyme Description | Catalase-peroxidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1213; End: 3378 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA2 | 81 | 181 | 4.6e-16 | 0.38823529411764707 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00649 | catalase_peroxidase_1 | 0.0 | 19 | 423 | 2 | 409 | N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal domain is not clear. |
| cd08200 | catalase_peroxidase_2 | 0.0 | 427 | 716 | 1 | 297 | C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal domain is not clear. |
| COG0376 | KatG | 0.0 | 1 | 720 | 7 | 730 | Catalase (peroxidase I) [Inorganic ion transport and metabolism]. |
| PRK15061 | PRK15061 | 0.0 | 9 | 719 | 3 | 725 | catalase/peroxidase. |
| TIGR00198 | cat_per_HPI | 0.0 | 9 | 721 | 1 | 715 | catalase/peroxidase HPI. As catalase, this enzyme catalyzes the dismutation of two molecules of hydrogen peroxide to dioxygen and two molecules of water. As a peroxidase, it uses hydrogen peroxide to oxidize donor compounds and produce water. KatG from E. coli is a homotetramer with two non-covalently associated iron protoheme IX groups per tetramer, but the ortholog from Synechococcus sp. is a homodimer with one protoheme. Important sites (numbered according to E. coli KatG) include heme ligands His-106 and His-267 and active site Trp-318. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family. [Cellular processes, Detoxification] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QPC71243.1 | 1.50e-303 | 7 | 719 | 40 | 773 |
| QZY04649.1 | 1.20e-294 | 22 | 719 | 4 | 714 |
| QQK46267.1 | 4.30e-28 | 58 | 402 | 3 | 263 |
| BCS01357.1 | 7.04e-28 | 60 | 403 | 6 | 265 |
| BCS13101.1 | 7.04e-28 | 60 | 403 | 6 | 265 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5SXX_A | 0.0 | 11 | 719 | 6 | 727 | Crystalstructure of the E198A variant of Burkholderia pseudomallei catalase-peroxidase KatG with INH [Burkholderia pseudomallei 1710b],5SXX_B Crystal structure of the E198A variant of Burkholderia pseudomallei catalase-peroxidase KatG with INH [Burkholderia pseudomallei 1710b] |
| 5SYW_A | 0.0 | 11 | 719 | 6 | 727 | Crystalstructure of Burkhoderia pseudomallei KatG variant Q233E [Burkholderia pseudomallei 1710b],5SYW_B Crystal structure of Burkhoderia pseudomallei KatG variant Q233E [Burkholderia pseudomallei 1710b] |
| 5SYV_A | 0.0 | 11 | 719 | 6 | 727 | Crystalstructure of Burkholderia pseudomallei KatG N240D variant [Burkholderia pseudomallei 1710b],5SYV_B Crystal structure of Burkholderia pseudomallei KatG N240D variant [Burkholderia pseudomallei 1710b] |
| 5SYU_A | 0.0 | 11 | 719 | 6 | 727 | Crystalstructure of Burkholderia pseudomallei KatG E242Q variant [Burkholderia pseudomallei 1710b],5SYU_B Crystal structure of Burkholderia pseudomallei KatG E242Q variant [Burkholderia pseudomallei 1710b] |
| 5SYY_A | 0.0 | 11 | 719 | 6 | 727 | Crystalstructure of the S324G variant of catalase-peroxidase from B. pseudomallei [Burkholderia pseudomallei 1710b],5SYY_B Crystal structure of the S324G variant of catalase-peroxidase from B. pseudomallei [Burkholderia pseudomallei 1710b] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2J2I9 | 0.0 | 1 | 720 | 1 | 730 | Catalase-peroxidase OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=katG PE=3 SV=1 |
| Q6NCP1 | 0.0 | 1 | 720 | 1 | 730 | Catalase-peroxidase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=katG PE=3 SV=1 |
| Q3SWP3 | 0.0 | 1 | 719 | 1 | 727 | Catalase-peroxidase OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=katG PE=3 SV=1 |
| Q2JZT8 | 0.0 | 1 | 720 | 1 | 728 | Catalase-peroxidase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) OX=347834 GN=katG PE=2 SV=1 |
| Q6W102 | 0.0 | 1 | 720 | 1 | 718 | Catalase-peroxidase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=katG PE=3 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000053 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |