Species | Afipia broomeae | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Afipia; Afipia broomeae | |||||||||||
CAZyme ID | MGYG000003734_01588 | |||||||||||
CAZy Family | AA3 | |||||||||||
CAZyme Description | putative GMC-type oxidoreductase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 42554; End: 44290 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
AA3 | 70 | 376 | 4.6e-97 | 0.5651408450704225 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK02106 | PRK02106 | 1.70e-166 | 70 | 572 | 6 | 531 | choline dehydrogenase; Validated |
COG2303 | BetA | 1.86e-138 | 70 | 577 | 8 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
pfam00732 | GMC_oxred_N | 4.02e-48 | 138 | 360 | 16 | 216 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
pfam05199 | GMC_oxred_C | 7.62e-40 | 431 | 568 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
PLN02785 | PLN02785 | 4.24e-25 | 52 | 565 | 38 | 569 | Protein HOTHEAD |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QWC20507.1 | 6.78e-116 | 70 | 572 | 6 | 524 |
CAB3230510.1 | 1.24e-106 | 65 | 572 | 20 | 555 |
ANI26486.1 | 8.69e-106 | 70 | 572 | 71 | 601 |
AWP09430.1 | 3.09e-102 | 70 | 572 | 20 | 550 |
CAG5086058.1 | 1.27e-92 | 70 | 572 | 15 | 563 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3T37_A | 2.12e-104 | 71 | 564 | 19 | 512 | Crystalstructure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti] |
4HA6_A | 3.88e-103 | 71 | 564 | 3 | 496 | Crystalstructure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti] |
3NNE_A | 2.94e-91 | 70 | 572 | 14 | 526 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
2JBV_A | 8.15e-91 | 70 | 572 | 14 | 526 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
3LJP_A | 1.14e-90 | 70 | 572 | 14 | 526 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8NE62 | 5.54e-114 | 45 | 572 | 17 | 571 | Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2 |
Q6UPE0 | 3.91e-112 | 70 | 572 | 46 | 576 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
Q8BJ64 | 9.48e-109 | 53 | 572 | 32 | 573 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
Q988C9 | 1.22e-104 | 70 | 575 | 7 | 536 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
Q47944 | 5.28e-103 | 69 | 572 | 4 | 527 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000083 | 0.000402 | 0.000012 | 0.945085 | 0.054401 | 0.000002 |
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