CAZyme Information: MGYG000003734_01886

Basic Information

• Species: Afipia broomeae
• Lineage: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Afipia; Afipia broomeae
• CAZyme ID: MGYG000003734_01886
• CAZy Family: GT83
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
537		60336.5	9.1969

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003734	5238503	MAG	Canada	North America

• Gene Location: Start: 43789; End: 45402 Strand: -

Full Sequence      

MLAPLREDPPDNLLYQSNLAISYPSDRYATAWRRNIMLWLDGAEPGWAIPAFLVGFVAIW
TLTLVLAYWNAGLHPDVLETWSVGRDWAWGNAKHPPLMGWVVHGWTLIFPKADWSFQLLA
TVNAAVALWSVDLIARRFVRGDKRLIVLLLLFLLPAYDFHAQRFNANSVLLAAWPLATYA
FLRSFEKRDIFWSVLAGLLGALAMLGKYYSVFLLAGFCFAALCHPRRAQYFGSKAPWISI
VAGLIALSPHILWLRTHGEPSFHYALDHAGLPFSESVSDVAKFFLGIAGFMILPTIVWIA
MIRFRWHEWLHDLANLDESLWLLAMIFVGTVLLAGTTALAFSSSLPGIWHLQALFMPVVV
AVCATRFPVDRVDTTNLAAIVLSLLLIFLVGSPFHALYRNWHPFKEGRNYYQEAATVVTQ
RWRAAFGVPLSRVGGDDGLIYATAFYSADHPRYNRPLETPDAPMVSDGWTALCFRDDPVC
MSWMKQTRQRIGRGSCLEFQATTRLWGYPGPSRKVAAMLVPPLSAKTKQAAMSGCKF

Enzyme Prediction     

No EC number prediction in MGYG000003734_01886.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT83	81	425	1.2e-16	0.6277777777777778

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13231	PMT_2	2.14e-22	93	253	1	160	Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
COG1807	ArnT	6.04e-10	31	391	3	359	4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCE26039.1	2.20e-48	47	522	22	523
QPB22219.1	2.44e-10	43	264	383	602
AQS41135.1	1.95e-09	52	356	19	325
ARU04540.1	1.41e-07	88	303	63	280
ABS14585.1	7.07e-07	52	257	28	234

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999755	0.000244	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
47	69
145	162
201	223
235	254
283	300
320	342
347	369
376	398