CAZyme Information: MGYG000003765_00573

Basic Information

• Species: Prevotella bergensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella bergensis
• CAZyme ID: MGYG000003765_00573
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
781		84860.82	6.3315

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003765	2329044	MAG	Canada	North America

• Gene Location: Start: 3660; End: 6005 Strand: +

Full Sequence      

MRLKILLALAAVALSGSAMAQTNAPAFPGAEGNGRYTTGGRGGKIIHVTNLKDSGTGSLR
AAVSGSLPKTVVFDVGGVIPLTRELSIGANTTILGQTAPYPGITLRYYTVKPGSNNIIRF
IRVRRGEEKDVNDGADAIWNRGLSNIILDHCSFSWSIDEVASFYDNNNFTMQWCTVGESL
NNAGHGKGAHGYGGIWGGKLASFHHNMIAHVNNRAPRFNGARYDWAGYTQNTEYDKYQWE
NSLQAENVDFRNCLIFDWGGGGCYGGPGGGYINMVNNYYKATPETSKKNRVTQVSIANSN
TSSDNDKYMGMTSRYYINGNYVHGYGPNYDWQGVAYDSGIQFINGERYTLDPSHYYGTAV
EYVSNAAGKPCVRIKLDQAKAPAGTVTTHRAETAYEKILSYCGASFFRDDVDARYMEEAK
NGRSTYTGSVTKTKGRIDRVSDVNGYTEKNFPTGKHDAGYDTDNDGIPDAWEIANGLDPS
NPNDAIAYSLDTKGYYTNLEVFANSLVEEIMKNGNADAESPVEEYYPAVNKADGIEYYTG
RMVKLTEEGTTDPETPATGEEGTITWTFNAGQSSLTAAAVLSDNLKDGIAATTLSLGSNF
DAAHVSTKPVNGVVETTLVPNEKQAAAGESNALTFTVTPNRNYVFQPTGVSFTISRIGTD
NGLFNVTWEAGSTTTTLDSALKPNRNNVDGGWYTSYIQTVTGVAASNEPGRLVINLYDMA
NDKQFGITNIVVKGRIRTTNGISDTHANRLQSNTYYNLAGQRVDKSYKGIIIYNGKKYLS
K

Enzyme Prediction     

No EC number prediction in MGYG000003765_00573.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	76	279	3.5e-68	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00656	Amb_all	7.91e-06	84	218	11	151	Amb_all domain.
COG3866	PelB	2.55e-04	59	217	65	235	Pectate lyase [Carbohydrate transport and metabolism].
pfam18884	TSP3_bac	8.03e-04	461	482	1	22	Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AGB28243.1	1.52e-295	1	555	1	554
VEH16322.1	2.99e-249	16	582	19	583
QNT67774.1	2.20e-235	19	535	1	536
QCD40778.1	9.78e-206	15	545	10	572
QCP73827.1	9.78e-206	15	545	10	572

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A1DPF0	7.94e-46	12	507	9	415	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2	2.03e-45	12	507	9	415	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88	2.03e-45	12	507	9	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7	3.99e-43	26	507	22	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7	6.50e-42	26	507	22	414	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000201	0.999147	0.000161	0.000158	0.000152	0.000134

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003765_00573.