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CAZyme Information: MGYG000003769_01528

You are here: Home > Sequence: MGYG000003769_01528

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium;
CAZyme ID MGYG000003769_01528
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
552 MGYG000003769_12|CGC4 61839.44 5.9365
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003769 4856301 MAG Canada North America
Gene Location Start: 54803;  End: 56461  Strand: -

Full Sequence      Download help

MKFKKSIIWL  LVISFLTSTF  LIGGSKAIKA  ADFDSIPNTS  KTFKNYDKSF  MSVTGFASLG60
VKDRSEYHGT  SYYRKVMNGR  EFLQAILDAS  NGTVKVIEVA  KDLDLGWLAL  NLSKEEAKTY120
SFVTKYPNPT  NGFTNPLLAE  SGVSKLSIAN  IDGLTIFSKK  GKTIKHAEIK  LQGSVNDIVI180
RNLNFDEMWQ  WDDTGKHKEV  GWSFIKVNGA  NNVWIDHCKF  SIAADGMIDV  ENGASNITLS240
WCEFGLEATE  KPEKDSSIYQ  SINFMEDKYM  ANELGETSVY  SNMRNAGATK  EQIMAYAAYH300
SKCHLNGSGD  KDYVNYVDKN  GVEYKDGNQR  IRLTLAYNSY  SNIGQRIPMI  RQGVGHLYNC360
YFDNSTHEEI  LENVSAIATY  GTDKLSRALN  ARNGASIAAD  TCVFNGITEP  IVGAEIQGMD420
TSNMNAPWDT  LFQSAYNRNL  IVNSKITNKN  GTYIGSSWDN  DGENLFTPGF  RWYDKSTIGN480
WAWSSKIVGS  ENMSKSNPPS  DPFTFEYNYD  EELAYTYNVL  PLDKVESTIK  KYAGADTVNM540
NPKDWLKIEY  TK552

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Created with Snap275582110138165193220248276303331358386414441469496524150405PL1
Family Start End Evalue family coverage
PL1 150 405 1.1e-32 0.8118811881188119

CDD Domains      download full data without filtering help

Created with Snap275582110138165193220248276303331358386414441469496524155366Amb_all174365PelB175364Pec_lyase_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 2.51e-13 155 366 19 167
Amb_all domain.
COG3866 PelB 1.47e-10 174 365 123 251
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 0.001 175 364 59 190
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Created with Snap2755821101381651932202482763033313583864144414694965241551QNF29855.1|PL11549QGH35942.1|PL117550QYR22341.1|PL11551ADL50775.1|CBM13|PL11551BAV13078.1|CBM13|PL1
Hit ID E-Value Query Start Query End Hit Start Hit End
QNF29855.1 3.75e-309 1 551 1 551
QGH35942.1 2.77e-297 1 549 1 549
QYR22341.1 9.13e-273 17 550 17 552
ADL50775.1 1.69e-263 1 551 1 553
BAV13078.1 1.88e-263 1 551 4 556

PDB Hits      download full data without filtering help

Created with Snap275582110138165193220248276303331358386414441469496524703635GT5_A554085AMV_A554081BN8_A554083KRG_A554082BSP_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GT5_A 5.26e-39 70 363 27 293
Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602]
5AMV_A 1.81e-11 55 408 15 343
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 1.98e-11 55 408 36 364
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
3KRG_A 4.26e-11 55 408 15 343
ChainA, Pectate lyase [Bacillus subtilis]
2BSP_A 4.63e-11 55 408 36 364
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap27558211013816519322024827630333135838641444146949652470379sp|D3JTC2|PLYB_PAEAM55408sp|P39116|PLY_BACSU151377sp|Q9WYR4|PTLY_THEMA151377sp|B1L969|PTLY_THESQ301415sp|A1CYB8|PLYA_NEOFI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
D3JTC2 2.86e-39 70 379 56 339
Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1
P39116 1.08e-10 55 408 36 364
Pectate lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pel PE=1 SV=1
Q9WYR4 2.50e-07 151 377 79 255
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
B1L969 1.02e-06 151 377 77 253
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1
A1CYB8 1.50e-06 301 415 178 269
Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001293 0.971430 0.026517 0.000288 0.000225 0.000210

TMHMM  Annotations      download full data without filtering help

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