logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003769_01545

You are here: Home > Sequence: MGYG000003769_01545

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium;
CAZyme ID MGYG000003769_01545
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
604 MGYG000003769_12|CGC5 66457 4.4796
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003769 4856301 MAG Canada North America
Gene Location Start: 76450;  End: 78264  Strand: +

Full Sequence      Download help

MAVGNLLVQV  RSANDIIPVP  DARVRIRDEA  GNVLYDLVTD  ESGDTQEVTL  DTVDKSLSLD60
PNYTGTPYTS  YTVDVTATGF  NSLTIYGVQI  FDGQNAIQPV  TLIPMQERQR  NANHYEIVLG120
KHAVEMNEPR  NQVGTNQDPR  VLRFVVIPNP  ITVHLGTPTS  SASNVQVSFP  DYVKNVASSE180
IYPTWPDAAL  RANIYAIITF  ALNRVFTEWY  RSRGYNFDIT  NSTAYDQYFV  YGRTIYESIS240
NIVDEIFNQY  VRREGHITPY  FTSFCNGTTA  TCAGLSQWGT  VTLAEHGMTP  LQILRYYYPD300
DIEIAETNII  TNVLVSYPGT  ALRVGSTGLD  VQTIQTYLTR  IRKNYPAIPA  ITDPPGVFGA360
STEAAVKKFQ  SIFNLTPDGI  VGRATWNKIS  SIFVALTKLA  ELNSEGGALG  IGTVPPSTTL420
YWGESGPDVI  TLQYLLSVIS  EFYPTIPSLT  QSGNFDNQTY  QAVLAFQQMM  GLTADGIVGP480
ATWAALYDVY  LGIIDNVPEP  GPTPGVIEYV  VKPGDSLWLI  ANRYHTTVDA  IKALNNLTSD540
VIYVGQVLKI  PTQTSTPTFS  YTVRSGDTLW  LLARRFGTTV  DEIKALNNLT  SDVLNVGQVL600
QIPE604

Enzyme Prediction      help

No EC number prediction in MGYG000003769_01545.

CAZyme Signature Domains help

Created with Snap306090120151181211241271302332362392422453483513543573509551CBM50561603CBM50
Family Start End Evalue family coverage
CBM50 509 551 1.8e-17 0.975
CBM50 561 603 5.6e-16 0.975

CDD Domains      download full data without filtering help

Created with Snap306090120151181211241271302332362392422453483513543573496602PRK06347322486PGRP496602PRK06347509602PRK06347520604LysM
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 2.23e-24 496 602 469 591
1,4-beta-N-acetylmuramoylhydrolase.
COG3409 PGRP 7.98e-21 322 486 39 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
PRK06347 PRK06347 1.03e-20 496 602 395 523
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 5.86e-19 509 602 333 449
1,4-beta-N-acetylmuramoylhydrolase.
COG1388 LysM 1.69e-17 520 604 1 112
LysM repeat [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Created with Snap3060901201511812112412713023323623924224534835135435731413VTQ95559.1|GH04412QES76183.1|GH01416QPJ86275.1|GH01405AWV81152.1|GH04415AWZ49621.1|GH0
Hit ID E-Value Query Start Query End Hit Start Hit End
VTQ95559.1 3.35e-99 1 413 1 425
QES76183.1 1.70e-98 4 412 2 420
QPJ86275.1 4.49e-97 1 416 1 424
AWV81152.1 1.88e-95 1 405 1 410
AWZ49621.1 7.31e-95 4 415 5 428

PDB Hits      download full data without filtering help

Created with Snap3060901201511812112412713023323623924224534835135435735606034UZ2_A5606034XCM_A4996044B8V_A4134865TV7_A5606035YZ6_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4UZ2_A 1.93e-08 560 603 4 47
Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8]
4XCM_A 2.38e-07 560 603 4 47
Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8]
4B8V_A 6.57e-07 499 604 104 218
ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
5TV7_A 8.32e-07 413 486 102 169
ChainA, Putative peptidoglycan-binding/hydrolysing protein [Clostridioides difficile 630],5TV7_B Chain B, Putative peptidoglycan-binding/hydrolysing protein [Clostridioides difficile 630]
5YZ6_A 1.08e-06 560 603 4 48
Solutionstructure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap306090120151181211241271302332362392422453483513543573495602sp|O07532|LYTF_BACSU511602sp|P54421|LYTE_BACSU509602sp|O31852|CWLS_BACSU509602sp|Q49UX4|SLE1_STAS1508602sp|O34669|YOCH_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
O07532 3.78e-21 495 602 228 350
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
P54421 9.60e-19 511 602 30 129
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O31852 2.28e-18 509 602 159 268
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
Q49UX4 5.99e-16 509 602 29 129
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1
O34669 2.10e-15 508 602 27 121
Cell wall-binding protein YocH OS=Bacillus subtilis (strain 168) OX=224308 GN=yocH PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000034 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003769_01545.