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CAZyme Information: MGYG000003769_03127

You are here: Home > Sequence: MGYG000003769_03127

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium;
CAZyme ID MGYG000003769_03127
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2758 297693.92 4.5888
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003769 4856301 MAG Canada North America
Gene Location Start: 6697;  End: 14973  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003769_03127.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 1879 2259 4.8e-128 0.9786666666666667
CE8 739 1118 1.7e-43 0.9583333333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02497 PLN02497 6.74e-18 867 1124 109 318
probable pectinesterase
COG4677 PemB 1.92e-17 682 1060 33 350
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 3.71e-17 739 1109 2 275
Pectinesterase.
PLN02745 PLN02745 5.62e-17 728 1076 273 527
Putative pectinesterase/pectinesterase inhibitor
PLN02708 PLN02708 1.63e-16 725 1110 229 527
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADL35206.1 0.0 144 2220 113 2396
BCJ94249.1 0.0 1224 2757 140 1641
AFK85374.1 0.0 167 1154 749 1738
ABX44216.1 0.0 1296 2286 205 1212
ACR71158.1 1.07e-236 1312 2266 612 1644

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.30e-42 1879 2256 14 369
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 3.90e-17 1880 2163 3 325
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]
5C1E_A 8.87e-16 739 1102 11 269
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 3.92e-15 739 1102 11 269
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
3UW0_A 2.01e-09 734 1049 30 274
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.11e-57 1495 2165 23 646
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A7 1.25e-41 1879 2256 39 394
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 1.25e-41 1879 2256 39 394
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
A2QK82 9.72e-15 739 1102 39 297
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
A1DBT4 7.65e-13 929 1090 143 284
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000255 0.999024 0.000211 0.000177 0.000152 0.000141

TMHMM  Annotations      download full data without filtering help

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