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CAZyme Information: MGYG000003769_03889

You are here: Home > Sequence: MGYG000003769_03889

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium;
CAZyme ID MGYG000003769_03889
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2003 MGYG000003769_64|CGC1 226127.21 4.5618
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003769 4856301 MAG Canada North America
Gene Location Start: 11776;  End: 17787  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003769_03889.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 1093 1227 1.1e-36 0.9850746268656716
CBM51 1606 1745 1.1e-36 0.9850746268656716
CBM32 1337 1461 7.1e-17 0.9274193548387096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 1.14e-44 1090 1228 1 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305 NPCBM 1.16e-38 1606 1745 4 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 1.91e-38 1093 1228 6 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
smart00776 NPCBM 1.38e-31 1602 1745 2 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam13402 Peptidase_M60 5.43e-16 664 889 29 264
Peptidase M60, enhancin and enhancin-like. This family of peptidases contains a zinc metallopeptidase motif (HEXXHX(8,28)E) and possesses mucinase activity. It includes the viral enhancins as well as enhancin-like peptidases from bacterial species. Enhancins are a class of metalloproteases found in some baculoviruses that enhance viral infection by degrading the peritrophic membrane (PM) of the insect midgut. Bacterial enhancins are found to be cytotoxic when compared to viral enhancin, however, suggesting that the bacterial enhancins do not enhance infection in the same way as viral enhancin. Bacterial enhancins may have evolved a distinct biochemical function. These bacterial domains are peptidases targetting host glycoproteins and thus probably play an important role in successful colonisation of both vertebrate mucosal surfaces and the invertebrate digestive tract by both mutualistic and pathogenic microbes. This family has been augmented by a merge with the sequences in the Enhancin Pfam family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AQM59432.1 0.0 1 2001 1 2444
QJS19250.1 0.0 50 2000 275 2288
QOV12641.1 0.0 46 2000 47 1937
QPQ34479.1 0.0 13 1997 11 1930
AHN23111.1 0.0 50 1997 47 1930

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JFS_A 4.36e-249 49 1010 26 980
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JND_A 6.71e-153 49 454 44 449
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JNB_A 2.88e-149 49 454 44 449
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JS4_A 9.22e-140 499 1306 24 831
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
5KDJ_A 9.12e-103 435 1089 24 672
ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A9WNA0 4.81e-06 1093 1274 1164 1351
Putative endo-alpha-N-acetylgalactosaminidase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) OX=288705 GN=RSal33209_1326 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000334 0.998878 0.000196 0.000208 0.000188 0.000170

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003769_03889.