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CAZyme Information: MGYG000003769_04117

You are here: Home > Sequence: MGYG000003769_04117

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium;
CAZyme ID MGYG000003769_04117
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
497 MGYG000003769_84|CGC1 54119.33 5.8374
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003769 4856301 MAG Canada North America
Gene Location Start: 6500;  End: 7993  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003769_04117.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 81 261 2.1e-58 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 3.65e-06 44 301 49 312
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 5.48e-04 431 452 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO19292.1 1.94e-216 1 490 1 491
BAV13046.1 2.12e-209 2 491 16 513
ADL50763.1 2.12e-209 2 491 16 513
CBL17517.1 5.28e-207 22 487 29 489
AUO19603.1 1.37e-178 32 493 51 508

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.99e-53 10 479 3 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.82e-53 10 479 3 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 4.75e-47 24 479 15 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 6.60e-47 10 479 3 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 6.74e-47 25 479 15 415
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000271 0.998988 0.000234 0.000177 0.000165 0.000146

TMHMM  Annotations      download full data without filtering help

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