You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000003777_01931
You are here: Home > Sequence: MGYG000003777_01931
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Muricomes; | |||||||||||
| CAZyme ID | MGYG000003777_01931 | |||||||||||
| CAZy Family | PL42 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 14730; End: 17525 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL42 | 526 | 820 | 1.4e-88 | 0.9966216216216216 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam15892 | BNR_4 | 2.18e-75 | 549 | 804 | 2 | 269 | BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase. |
| COG4547 | CobT2 | 3.00e-05 | 24 | 133 | 210 | 305 | Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphorib... [Coenzyme transport and metabolism]. |
| PHA03169 | PHA03169 | 1.48e-04 | 23 | 148 | 129 | 264 | hypothetical protein; Provisional |
| pfam13517 | VCBS | 0.008 | 355 | 405 | 1 | 55 | Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR). |
| pfam13517 | VCBS | 0.009 | 310 | 362 | 1 | 57 | Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR). |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QDB80652.1 | 5.78e-123 | 516 | 903 | 96 | 485 |
| AWW30209.1 | 7.95e-118 | 520 | 922 | 37 | 436 |
| QDH77890.1 | 4.66e-116 | 520 | 913 | 37 | 425 |
| QIK53697.1 | 2.10e-114 | 522 | 913 | 28 | 414 |
| EGK01332.1 | 4.57e-113 | 522 | 918 | 30 | 420 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5MUK_A | 1.14e-104 | 517 | 927 | 25 | 427 | GlycosideHydrolase BT3686 [Bacteroides thetaiotaomicron VPI-5482],5MUL_A Glycoside Hydrolase BT3686 bound to Glucuronic Acid [Bacteroides thetaiotaomicron VPI-5482] |
| 5MUM_A | 3.39e-103 | 499 | 914 | 15 | 416 | GlycosideHydrolase BACINT_00347 [Bacteroides intestinalis DSM 17393] |
| 4IRT_A | 3.25e-99 | 517 | 931 | 8 | 414 | Crystalstructure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution [Bacteroides ovatus ATCC 8483] |
| 5MVH_A | 5.51e-99 | 517 | 914 | 25 | 411 | GlycosideHydrolase BACCELL_00856 [Bacteroides cellulosilyticus DSM 14838] |
| 7ESK_A | 3.44e-20 | 527 | 791 | 23 | 303 | ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum],7ESM_A Chain A, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000466 | 0.998765 | 0.000229 | 0.000172 | 0.000179 | 0.000155 |