logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003803_00831

You are here: Home > Sequence: MGYG000003803_00831

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea conspicua
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea conspicua
CAZyme ID MGYG000003803_00831
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
382 42447.38 6.8222
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003803 3817683 MAG Canada North America
Gene Location Start: 2176;  End: 3324  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003803_00831.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 8 365 1.5e-138 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 0.0 5 381 1 376
lipid-A-disaccharide synthase; Reviewed
TIGR00215 lpxB 1.80e-174 1 379 1 385
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
COG0763 LpxB 2.03e-166 5 382 1 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 3.15e-159 8 376 1 374
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
PRK01021 lpxB 1.15e-43 10 327 231 551
lipid-A-disaccharide synthase; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTC49895.1 1.04e-266 1 382 1 382
AZI50001.1 4.21e-266 1 382 1 382
QAV43596.1 4.21e-266 1 382 1 382
QIA53868.1 4.21e-266 1 382 1 382
QGY59185.1 4.21e-266 1 382 1 382

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8N_A 4.27e-219 4 380 5 381
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]
5W8S_A 3.50e-218 4 380 5 381
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B2VHX9 2.20e-232 1 379 1 379
Lipid-A-disaccharide synthase OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=lpxB PE=3 SV=1
A4W6S7 1.26e-229 4 380 5 381
Lipid-A-disaccharide synthase OS=Enterobacter sp. (strain 638) OX=399742 GN=lpxB PE=3 SV=1
A8ALA6 6.95e-227 4 380 5 381
Lipid-A-disaccharide synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=lpxB PE=3 SV=1
B5RHG7 2.32e-225 4 380 5 381
Lipid-A-disaccharide synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=lpxB PE=3 SV=1
B5FJ29 2.32e-225 4 380 5 381
Lipid-A-disaccharide synthase OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000028 0.000023 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003803_00831.