CAZyme Information: MGYG000003810_00831

Basic Information

• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum
• CAZyme ID: MGYG000003810_00831
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1214		128789.9	6.119

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003810	1970833	MAG	Canada	North America

• Gene Location: Start: 25741; End: 29385 Strand: +

Full Sequence      

MNLKKLAKATGITVLATSLVALSQLPAVAAPVQAEIIPATTYYVSAAGNDTNDGKSEAKP
LKTLGAVNKLTLHAGDKILLKRGDVFNNQNLCISGDKAFRFNDGTTCAYQADSDGAPLVI
SAYGEGDKPVIAANGEGQWKLDYGLTLGHSQHYLAKDAVSSTVMLKDAENIELSDLEITN
IRLEDGSGKENGCAYNDNCALDRTGIAGIAQNQGTLDHVALKNLYVHDVKGNIYNKHSVN
GAIYFSSLIASDQMKPAANRTAPGFKPALVKPEKGYPRFNDLQIINNRVENSGRWGIAAV
YSAYASVAVDGRIQIPGEVITKYGSTNVVIINNFIKNIGGDAITAMYGYKPVVESNVATE
IATQMNTTDYLFAKDTPGKFAKTGGRVAASIWPWKSKDAVFRFNEGFNTQNADKGNGDGM
PWDADSGDGTVYEYNYSANNSGGTVMFCGDQAANSTFRFNIAQNDSLGALSPTFWDGGYS
GKYPNAHVYNNTFYLKAGSSILHPAQAQQGTMKVENNIFYNMSDQPRTEAWNPLGHITWD
PKDIDGNAKVTYSHNLYYNYANYPASDLNPVKVSKGSAVLADPGKAPSDAATGMKARPHY
FPGLSYAEADAKTTVFDGYKLAANSPAIGKGKEIVDDNGFALGTDFFGRTANTFDIGAVS
TDQKPLPPATVTDSAKLVSTTYQVTDGETVPSKNGAYKAGNTIHVPSTEKSPSTVAEVLS
NLTVEGKAQIVDAAGNAQAGDALVATGMKLKITSLDGKVTSEFPLSIDNVYSWLDDYTHN
VQGNVWFGQKQTGANGKWVNIDKADPTWPNWQVDQYYGPGINGAQLAPTDRSALYGLLSD
SPTSAGATAMAWRAPKTGYITFKIKDAAAGKPAEPFLRQGDATGGTVTVKLLVNGIEKRS
LTLVKKEIRPDGEFNFTANDANALRVSKGDFVRVVAESSGNPAQPSMFVSPTITYIDRTV
DTEVIPVKPGTATGDPDTPTPGQDPQTDKGYVEGKVPGFALSLAGDKVTGKVTLPQVEGI
EYLVNGAPLADSYPAGPVVVTLKAKAGYKLGESATTEWKFTVPATPEFASETGKLQIPTT
VGVSYDAQNQTVAPGKSVTVTATASDDYSFAATRAVKWTFTADQKDDPKPGTDPQKPGTD
PEKPGTVPSDNPTQPDSGTVADGKQKNPNKPATSVRQNRGSLVTTGSLAGMVAIAALTLG
VAGMAIVRRRAKEQ

Enzyme Prediction     

No EC number prediction in MGYG000003810_00831.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	40	659	3.5e-135	0.9918533604887984

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	4.42e-04	280	363	9	92	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADP35567.1	1.38e-158	40	1036	68	974
ADO52688.1	1.51e-156	40	972	34	899
QTQ17888.1	2.21e-156	40	972	34	901
ESV34046.1	5.80e-156	40	958	47	950
BBA56588.1	2.50e-155	40	972	34	900

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	1.03e-153	35	658	4	574	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A	2.91e-121	40	659	18	595	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A	8.53e-121	40	659	14	607	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A	5.46e-82	42	518	247	662	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	3.53e-78	42	518	247	662	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000289	0.999014	0.000163	0.000192	0.000164	0.000152

TMHMM  Annotations     

start	end
1185	1207