logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003811_01803

You are here: Home > Sequence: MGYG000003811_01803

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium amycolatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium amycolatum
CAZyme ID MGYG000003811_01803
CAZy Family GT85
CAZyme Description Galactan 5-O-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
673 72192.48 4.7224
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003811 2349574 MAG Canada North America
Gene Location Start: 1543;  End: 3564  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003811_01803.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT85 55 489 1.3e-148 0.9929742388758782

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam12250 AftA_N 5.53e-166 61 485 8 424
Arabinofuranosyltransferase N terminal. This domain family is found in bacteria, and is typically between 430 and 441 amino acids in length. This family is the N terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The N terminal region has been predicted to span 11 transmembrane regions.
pfam12249 AftA_C 3.93e-90 495 672 1 177
Arabinofuranosyltransferase A C terminal. This domain family is found in bacteria, and is typically between 179 and 190 amino acids in length. This family is the C terminal region of AftA. The enzyme catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. The C terminal region is predicted to be directed towards the periplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQU97312.1 0.0 1 673 1 673
QQB83342.1 0.0 1 673 1 673
QQV00906.1 0.0 1 673 1 673
QPR31463.1 0.0 1 673 1 673
ASE57093.1 0.0 1 673 1 673

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NTW4 5.76e-199 39 669 13 656
Galactan 5-O-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftA PE=1 SV=1
A0R611 6.37e-126 138 673 84 614
Galactan 5-O-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftA PE=3 SV=1
P9WN02 9.83e-116 51 673 28 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftA PE=3 SV=1
P9WN03 9.83e-116 51 673 28 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftA PE=1 SV=1
Q7TVN5 9.83e-116 51 673 28 638
Galactan 5-O-arabinofuranosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=aftA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999889 0.000116 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
51 73
88 110
123 145
188 210
272 294
298 320
327 349
376 398
405 427
431 453
476 495