logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003812_01059

You are here: Home > Sequence: MGYG000003812_01059

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella colorans
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella colorans
CAZyme ID MGYG000003812_01059
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
268 MGYG000003812_29|CGC1 31003.63 4.9863
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003812 2316911 MAG Canada North America
Gene Location Start: 2367;  End: 3173  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003812_01059.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 5 227 3.1e-40 0.4449152542372881

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 1.41e-49 6 227 1 214
Starch synthase catalytic domain.
PRK14098 PRK14098 7.00e-43 1 179 1 180
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 1.68e-33 5 226 1 212
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 2.51e-23 5 179 2 155
glycogen synthase GlgA.
COG0297 GlgA 9.78e-22 5 255 2 234
Glycogen synthase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB28837.1 3.15e-170 1 268 1 268
ALO48542.1 1.57e-147 1 267 1 265
VEH15703.1 2.31e-147 1 267 1 265
BCS86507.1 1.50e-145 1 267 1 265
QYR10714.1 9.70e-144 1 267 1 266

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B3EGV0 1.76e-38 5 179 7 180
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1
Q3B6C3 4.71e-37 5 179 7 180
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
A1BIY8 6.54e-37 5 179 7 180
Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=glgA PE=3 SV=1
B4S584 1.29e-36 5 226 7 224
Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) OX=290512 GN=glgA PE=3 SV=1
B4SC83 2.43e-36 5 179 7 180
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999988 0.000039 0.000003 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003812_01059.