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CAZyme Information: MGYG000003838_01766

You are here: Home > Sequence: MGYG000003838_01766

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAMM01 sp003150405
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; QAMM01; QAMM01 sp003150405
CAZyme ID MGYG000003838_01766
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
503 MGYG000003838_15|CGC1 57726.74 5.1044
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003838 2498756 MAG United States North America
Gene Location Start: 17416;  End: 18927  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003838_01766.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 164 488 1.2e-27 0.9636963696369637

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 5.24e-09 206 489 6 263
Glycosyl hydrolase family 10.
COG3693 XynA 4.31e-07 227 485 93 333
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANW97941.1 2.34e-113 4 494 6 488
AGI38568.1 2.34e-113 4 494 6 488
AGC67515.1 2.34e-113 4 494 6 488
ANX00491.1 3.70e-112 4 494 6 488
AEF81843.1 1.14e-108 4 495 6 487

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
F4JG10 1.59e-07 182 409 422 637
Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003838_01766.