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CAZyme Information: MGYG000003838_01885

You are here: Home > Sequence: MGYG000003838_01885

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAMM01 sp003150405
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; QAMM01; QAMM01 sp003150405
CAZyme ID MGYG000003838_01885
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2188 MGYG000003838_18|CGC1 249470.72 5.2805
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003838 2498756 MAG United States North America
Gene Location Start: 9889;  End: 16455  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003838_01885.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 2.32e-67 883 1417 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 7.06e-30 1558 1749 439 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0553 HepA 2.21e-10 1178 1926 147 848
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair].
smart00487 DEXDc 1.16e-09 1361 1464 7 110
DEAD-like helicases superfamily.
pfam02384 N6_Mtase 4.92e-08 658 844 28 234
N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 571 2130 1548 3167
QIW86704.1 0.0 571 2130 1616 3235
QIW86628.1 0.0 571 2130 1616 3235
AXF51455.1 0.0 564 2146 1773 3419
AEY69616.1 0.0 564 2161 1680 3341

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.29e-34 586 1944 47 1577
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003838_01885.