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CAZyme Information: MGYG000003841_01266

You are here: Home > Sequence: MGYG000003841_01266

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; ;
CAZyme ID MGYG000003841_01266
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
390 44029.71 6.4189
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003841 1511057 MAG United States North America
Gene Location Start: 960;  End: 2132  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003841_01266.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 99 369 8.2e-48 0.7630769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.14e-14 75 292 165 391
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 1.62e-06 112 217 113 221
Probable polygalacturonase At3g15720
PLN02793 PLN02793 9.91e-06 114 211 145 254
Probable polygalacturonase
pfam00295 Glyco_hydro_28 2.34e-05 139 369 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 1.59e-04 83 226 112 248
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACK41503.1 6.28e-119 2 388 95 482
ACI19833.1 2.49e-118 2 387 95 481
ABX43664.1 6.20e-114 10 384 135 511
BCK00431.1 1.92e-101 10 384 137 513
QTE67472.1 2.08e-101 10 387 103 484

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.28e-08 140 213 194 267
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.61e-06 144 226 208 298
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000076 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003841_01266.