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CAZyme Information: MGYG000003843_01597
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS693 sp900544555 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-138; UMGS693; UMGS693 sp900544555 | |||||||||||
| CAZyme ID | MGYG000003843_01597 | |||||||||||
| CAZy Family | GT83 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 21193; End: 25059 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT39 | 847 | 1070 | 7e-55 | 0.9192825112107623 |
| GT83 | 248 | 699 | 1.7e-19 | 0.7574074074074074 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam16192 | PMT_4TMC | 3.70e-26 | 1086 | 1260 | 3 | 198 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
| COG5542 | COG5542 | 1.03e-24 | 295 | 612 | 87 | 397 | Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism]. |
| COG1928 | PMT1 | 2.35e-19 | 852 | 1264 | 50 | 695 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
| pfam02366 | PMT | 3.13e-16 | 845 | 1019 | 16 | 204 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
| pfam13231 | PMT_2 | 6.38e-14 | 874 | 1018 | 1 | 136 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASA25569.1 | 1.57e-258 | 8 | 1264 | 10 | 1268 |
| QSF45552.1 | 5.59e-257 | 8 | 1264 | 10 | 1273 |
| CQR52353.1 | 4.62e-256 | 10 | 1264 | 12 | 1275 |
| AIQ39188.1 | 4.89e-253 | 10 | 1264 | 12 | 1279 |
| AIQ27397.1 | 9.70e-253 | 10 | 1264 | 12 | 1279 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| L8F4Z2 | 4.26e-25 | 852 | 1262 | 67 | 515 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
| P9WN04 | 7.86e-23 | 852 | 1262 | 73 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
| P9WN05 | 7.86e-23 | 852 | 1262 | 73 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
| Q8NRZ6 | 9.19e-19 | 875 | 1262 | 99 | 519 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000256 | 0.999088 | 0.000181 | 0.000159 | 0.000146 | 0.000142 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 7 | 29 |
| 207 | 229 |
| 250 | 272 |
| 304 | 326 |
| 362 | 379 |
| 383 | 402 |
| 415 | 437 |
| 450 | 467 |
| 488 | 505 |
| 515 | 537 |
| 544 | 566 |
| 570 | 584 |
| 589 | 611 |
| 626 | 648 |
| 698 | 720 |
| 894 | 916 |
| 951 | 973 |
| 983 | 1016 |
| 1048 | 1070 |
| 1143 | 1162 |
| 1169 | 1188 |
| 1192 | 1211 |
| 1224 | 1246 |