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CAZyme Information: MGYG000003846_01258

You are here: Home > Sequence: MGYG000003846_01258

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312;
CAZyme ID MGYG000003846_01258
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
711 81373.33 9.0196
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003846 2141960 MAG United States North America
Gene Location Start: 34853;  End: 36988  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003846_01258.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 210 703 2.2e-105 0.7840735068912711

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 0.006 450 515 126 186
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDV65278.1 2.08e-111 214 707 209 698
AXP07840.1 2.31e-109 182 705 195 718
ASV75458.1 2.57e-108 214 705 194 681
AXP07838.1 3.25e-105 213 705 219 709
ADE53394.1 6.43e-103 208 705 194 690

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4BQ2_A 2.08e-61 217 706 204 747
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 5.38e-61 217 706 204 747
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A 1.53e-56 217 705 223 762
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A 6.43e-55 217 705 223 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 1.04e-64 217 705 432 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 1.91e-42 218 711 400 922
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001005 0.582313 0.415839 0.000294 0.000284 0.000251

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003846_01258.