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CAZyme Information: MGYG000003863_00540
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; | |||||||||||
| CAZyme ID | MGYG000003863_00540 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 150; End: 1253 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 38 | 312 | 3.6e-49 | 0.8547854785478548 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 1.30e-30 | 41 | 310 | 3 | 263 | Glycosyl hydrolase family 10. |
| pfam00331 | Glyco_hydro_10 | 1.41e-25 | 41 | 312 | 46 | 310 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 4.07e-25 | 41 | 310 | 69 | 337 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ARI46379.1 | 8.29e-152 | 22 | 344 | 57 | 379 |
| AGI38801.1 | 4.09e-151 | 2 | 341 | 49 | 388 |
| AGC67759.1 | 4.09e-151 | 2 | 341 | 49 | 388 |
| ANX00707.1 | 4.09e-151 | 2 | 341 | 49 | 388 |
| ANW98166.1 | 4.09e-151 | 2 | 341 | 49 | 388 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5AY7_A | 1.17e-24 | 45 | 313 | 66 | 346 | Apsychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase [Aegilops speltoides subsp. speltoides],5AY7_B A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase [Aegilops speltoides subsp. speltoides],5D4Y_A A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase [environmental samples],5D4Y_B A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase [environmental samples] |
| 6WQW_A | 5.48e-18 | 45 | 286 | 51 | 293 | ChainA, Beta-xylanase [Thermobacillus composti] |
| 3EMC_A | 9.80e-18 | 62 | 290 | 69 | 299 | Crystalstructure of XynB, an intracellular xylanase from Paenibacillus barcinonensis [Paenibacillus barcinonensis],3EMQ_A Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor [Paenibacillus barcinonensis],3EMZ_A Crystal structure of xylanase XynB from Paenibacillus barcinonensis complexed with a conduramine derivative [Paenibacillus barcinonensis] |
| 1VBR_A | 1.29e-17 | 41 | 317 | 53 | 323 | Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima] |
| 5OFJ_A | 2.66e-17 | 62 | 310 | 79 | 335 | Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY13 | 2.02e-21 | 12 | 304 | 52 | 358 | Endo-1,4-beta-xylanase/feruloyl esterase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyn10D-fae1A PE=1 SV=1 |
| O69231 | 5.42e-17 | 62 | 290 | 70 | 300 | Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1 |
| Q60041 | 1.56e-16 | 5 | 312 | 36 | 327 | Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1 |
| Q12603 | 7.48e-16 | 62 | 286 | 97 | 316 | Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1 |
| P45703 | 1.12e-15 | 70 | 286 | 77 | 294 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999972 | 0.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |