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CAZyme Information: MGYG000003881_00328

You are here: Home > Sequence: MGYG000003881_00328

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-279;
CAZyme ID MGYG000003881_00328
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
623 MGYG000003881_1|CGC2 69371 9.9902
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003881 1968494 MAG United States North America
Gene Location Start: 389041;  End: 390912  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003881_00328.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 123 257 5.6e-25 0.8666666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd16894 MltD-like 5.17e-67 130 259 1 129
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
PRK10783 mltD 1.18e-52 89 496 72 444
membrane-bound lytic murein transglycosylase D; Provisional
PRK06347 PRK06347 6.27e-46 360 620 319 591
1,4-beta-N-acetylmuramoylhydrolase.
pfam01464 SLT 9.71e-35 125 235 1 112
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK06347 PRK06347 4.28e-33 363 560 396 592
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR10036.1 7.15e-191 1 559 1 545
ANU62627.1 7.15e-191 1 559 1 545
BCI63615.1 1.03e-190 27 621 27 649
QIM10870.1 3.89e-159 1 500 1 540
AHF12926.1 4.28e-158 49 498 4 442

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2MKX_A 8.44e-11 516 563 5 52
Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 4.94e-34 374 620 498 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P0AEZ7 3.04e-30 150 498 129 442
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1
P0AEZ8 3.04e-30 150 498 129 442
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1
Q5HRU2 3.95e-24 454 621 26 191
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1
Q8CMN2 3.95e-24 454 621 26 191
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.010684 0.987238 0.001309 0.000249 0.000238 0.000249

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003881_00328.