CAZyme Information: MGYG000003882_01883

Basic Information

• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella
• CAZyme ID: MGYG000003882_01883
• CAZy Family: GH0
• CAZyme Description: HTH-type transcriptional activator RhaR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
785	MGYG000003882_210|CGC1	91001.54	8.9354

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003882	3911502	MAG	United States	North America

• Gene Location: Start: 3855; End: 6212 Strand: +

Full Sequence      

MEHHLGDFSITVRDIRQYSPPESDGLTLLWLLEGNATLRHGDALRQIRGDELALINRRQR
WQLSAEQANAVMILHLTAGWLTRLDSDFFACDYRVSAENMDAADTLRQLMRQLLVAGLVN
HQPRYRLEANRWLSEIVLLLATRFTHPIVPSLRRGAENWSRRIINVVARIEANYQRRLSL
QEVAAAEFVSEAWLSRLFHKEVGVSFVQYITALRLGKAAEQLLTTRRSVQQVAQDNGFAS
TRIMSDLFKRQHGMTPRQFRQQQPPSAARPRVNLSEIWYPVAVERLYARLNEAEKNSEDA
PPLLLNPRQTRLIDVRQLPTRAPSLRHTRTIVTVRELDDLLREDVRRELEQLEQTLPVYG
IDIHDPFLSSRLFGEGWDDPTLAGYACWYNLQQLFSWLAQKGWTVVLHTGLTTRCDLLQR
FLQLAANHFPPATVASWRFVWHWSPQASEAARQLAWRQQREVLAAALPQLQMGIWHRFPE
SGIADDPLLHSPLLSEADFLACQADANELLDLAQADSSKLAASESYPRQKLRQIHNALRQ
RQLSLPLWLLSWNTLTGDTRDTNGRFFRGALLMDNLLGIADQVWLAGFWLNSGLQGEAQA
NGKLDTSSLALHYLHGLPRPVHWVLWLWRRLRGEVLINDKNLLLLRHNDHYQLLLRNTVI
FNPWLSSEEAFTQRFRQPYTLRLEGLEGRWRIKQHLFDQHHGALFPLFEAFRSRSGPDEE
DYRWLQHHARPALSVHEERLEDGWLRVDSLQSNALVLYEFTPLGDQKRDNVTNTFRDKVR
RVNNV

Enzyme Prediction     

No EC number prediction in MGYG000003882_01883.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG2207	AraC	2.01e-24	160	268	19	127	AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342	HTH_ARAC	2.73e-23	177	260	1	84	helix_turn_helix, arabinose operon control protein.
COG3664	XynB	1.42e-22	416	763	85	427	Beta-xylosidase [Carbohydrate transport and metabolism].
pfam12833	HTH_18	2.93e-19	183	262	1	81	Helix-turn-helix domain.
COG4977	GlxA	5.27e-19	146	269	207	328	Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUS05955.1	0.0	1	765	1	765
BBS11906.1	0.0	1	765	1	765
QMR41899.1	0.0	1	763	1	763
QTK90621.1	0.0	1	765	1	765
QRZ88614.1	0.0	1	765	1	765

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6SWI_A	5.28e-12	175	261	20	106	TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
3OIO_A	1.22e-07	162	263	8	109	Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6GD21	4.13e-43	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6	4.13e-43	24	759	21	738	Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GKK1	7.46e-43	7	759	4	738	Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q99XB1	1.34e-42	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1
Q7A882	1.34e-42	24	759	21	738	Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000065	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003882_01883.