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CAZyme Information: MGYG000003892_00537

You are here: Home > Sequence: MGYG000003892_00537

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Roseburia sp900753715
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia; Roseburia sp900753715
CAZyme ID MGYG000003892_00537
CAZy Family GH10
CAZyme Description Endo-1,4-beta-xylanase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
467 MGYG000003892_4|CGC1 53551.73 4.4184
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003892 2971162 MAG United States North America
Gene Location Start: 9606;  End: 11009  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 100 466 2.6e-85 0.9636963696369637

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 1.09e-83 90 466 1 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 6.24e-77 166 464 14 263
Glycosyl hydrolase family 10.
COG3693 XynA 3.71e-61 108 466 40 339
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAA09971.1 2.86e-152 98 466 247 629
AOZ95205.1 3.59e-148 32 467 4 466
AKO82930.1 7.19e-148 98 466 58 441
ADL33052.1 2.31e-146 76 466 68 474
AHF25111.1 6.24e-145 98 466 64 447

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6D5C_A 1.09e-52 100 466 29 349
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
5OFJ_A 6.16e-52 101 466 18 337
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
5OFK_A 4.62e-51 101 466 18 337
Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725]
7NL2_A 6.70e-50 100 466 18 339
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
3MMD_A 9.81e-48 101 466 27 377
ChainA, Endo-1,4-beta-xylanase [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P10474 6.36e-48 100 466 51 371
Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1
P29126 1.00e-47 92 461 628 946
Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1
P23551 2.93e-47 90 461 38 376
Endo-1,4-beta-xylanase A OS=Butyrivibrio fibrisolvens OX=831 GN=xynA PE=3 SV=1
Q60037 9.91e-47 93 465 369 690
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
P40943 3.79e-46 101 466 55 405
Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.063933 0.526035 0.404298 0.000792 0.004021 0.000918

TMHMM  Annotations      download full data without filtering help

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