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CAZyme Information: MGYG000003893_01243

You are here: Home > Sequence: MGYG000003893_01243

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella multisaccharivorax
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella multisaccharivorax
CAZyme ID MGYG000003893_01243
CAZy Family GH43
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
690 MGYG000003893_32|CGC1 77160.54 6.781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003893 2702422 MAG United States North America
Gene Location Start: 20690;  End: 22762  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003893_01243.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH43 25 309 4.1e-105 0.9966555183946488

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd09019 galactose_mutarotase_like 7.04e-162 352 687 1 326
galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.
cd18616 GH43_ABN-like 5.86e-140 27 304 1 291
Glycosyl hydrolase family 43 such as arabinan endo-1 5-alpha-L-arabinosidase. This glycosyl hydrolase family 43 (GH43) subgroup includes mostly enzymes with endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activity. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
TIGR02636 galM_Leloir 6.45e-110 347 688 1 336
galactose mutarotase. Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.
PRK11055 galM 1.48e-105 347 689 6 341
galactose-1-epimerase; Provisional
PLN00194 PLN00194 5.44e-87 358 689 15 337
aldose 1-epimerase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUB89410.1 0.0 1 690 1 690
AEA20065.1 0.0 1 690 1 690
QUB93993.1 0.0 1 690 1 690
QUB89901.1 0.0 1 690 1 690
QUI92994.1 0.0 1 690 1 690

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1SNZ_A 1.96e-71 361 688 31 342
Crystalstructure of apo human galactose mutarotase [Homo sapiens],1SNZ_B Crystal structure of apo human galactose mutarotase [Homo sapiens],1SO0_A Crystal structure of human galactose mutarotase complexed with galactose [Homo sapiens],1SO0_B Crystal structure of human galactose mutarotase complexed with galactose [Homo sapiens],1SO0_C Crystal structure of human galactose mutarotase complexed with galactose [Homo sapiens],1SO0_D Crystal structure of human galactose mutarotase complexed with galactose [Homo sapiens]
4RNL_A 6.78e-61 347 690 19 343
Thecrystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus [Streptomyces platensis],4RNL_B The crystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus [Streptomyces platensis],4RNL_C The crystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus [Streptomyces platensis],4RNL_D The crystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus [Streptomyces platensis]
1L7J_A 4.70e-44 347 690 9 339
ChainA, galactose mutarotase [Lactococcus lactis],1L7J_B Chain B, galactose mutarotase [Lactococcus lactis],1L7K_A Chain A, galactose mutarotase [Lactococcus lactis],1L7K_B Chain B, galactose mutarotase [Lactococcus lactis],1MMU_A Chain A, Aldose 1-epimerase [Lactococcus lactis],1MMU_B Chain B, Aldose 1-epimerase [Lactococcus lactis],1MMX_A Chain A, Aldose 1-epimerase [Lactococcus lactis],1MMX_B Chain B, Aldose 1-epimerase [Lactococcus lactis],1MMY_A Chain A, Aldose 1-epimerase [Lactococcus lactis],1MMY_B Chain B, Aldose 1-epimerase [Lactococcus lactis],1MMZ_A Chain A, Aldose 1-epimerase [Lactococcus lactis],1MMZ_B Chain B, Aldose 1-epimerase [Lactococcus lactis],1MN0_A Chain A, Aldose 1-epimerase [Lactococcus lactis],1MN0_B Chain B, Aldose 1-epimerase [Lactococcus lactis]
1NS0_A 1.22e-43 347 690 9 339
ChainA, GALACTOSE MUTAROTASE [Lactococcus lactis],1NS0_B Chain B, GALACTOSE MUTAROTASE [Lactococcus lactis],1NS4_A Chain A, GALACTOSE MUTAROTASE [Lactococcus lactis],1NS4_B Chain B, GALACTOSE MUTAROTASE [Lactococcus lactis]
1LUR_A 1.39e-43 355 688 17 336
CrystalStructure of the GalM/aldose Epimerase Homologue from C. elegans, Northeast Structural Genomics Target WR66 [Caenorhabditis elegans],1LUR_B Crystal Structure of the GalM/aldose Epimerase Homologue from C. elegans, Northeast Structural Genomics Target WR66 [Caenorhabditis elegans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8K157 1.63e-74 361 688 29 340
Galactose mutarotase OS=Mus musculus OX=10090 GN=Galm PE=1 SV=1
Q66HG4 4.94e-72 361 688 29 340
Galactose mutarotase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1
P05149 7.91e-72 336 690 23 380
Aldose 1-epimerase OS=Acinetobacter calcoaceticus OX=471 GN=mro PE=1 SV=1
Q96C23 1.01e-70 361 688 29 340
Galactose mutarotase OS=Homo sapiens OX=9606 GN=GALM PE=1 SV=1
Q5R8U1 2.05e-69 361 688 29 340
Galactose mutarotase OS=Pongo abelii OX=9601 GN=GALM PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002399 0.994835 0.001685 0.000604 0.000255 0.000211

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003893_01243.