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CAZyme Information: MGYG000003900_00136
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; | |||||||||||
| CAZyme ID | MGYG000003900_00136 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 12227; End: 14392 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 10 | 328 | 8.9e-77 | 0.9791666666666666 |
| CE19 | 457 | 698 | 3.5e-26 | 0.5993975903614458 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 1.61e-64 | 18 | 330 | 94 | 404 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 1.96e-48 | 16 | 311 | 10 | 275 | Pectinesterase. |
| PLN02990 | PLN02990 | 1.66e-40 | 10 | 337 | 263 | 562 | Probable pectinesterase/pectinesterase inhibitor |
| PLN02432 | PLN02432 | 1.05e-39 | 7 | 319 | 12 | 277 | putative pectinesterase |
| PLN02708 | PLN02708 | 1.56e-39 | 16 | 336 | 251 | 550 | Probable pectinesterase/pectinesterase inhibitor |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATP54718.1 | 0.0 | 1 | 721 | 1 | 721 |
| QIA34433.1 | 0.0 | 1 | 719 | 1 | 719 |
| QUC03567.1 | 0.0 | 9 | 717 | 8 | 711 |
| QRP39805.1 | 3.20e-105 | 10 | 336 | 20 | 349 |
| ASN95501.1 | 3.20e-105 | 10 | 336 | 20 | 349 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 6.77e-26 | 18 | 288 | 44 | 310 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 1XG2_A | 7.40e-26 | 10 | 315 | 7 | 284 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
| 5C1E_A | 4.07e-23 | 15 | 278 | 16 | 245 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
| 5C1C_A | 7.44e-23 | 15 | 278 | 16 | 245 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
| 2NSP_A | 1.53e-22 | 18 | 288 | 18 | 286 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8GXA1 | 4.64e-37 | 10 | 337 | 260 | 559 | Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3 |
| Q43043 | 3.95e-29 | 10 | 334 | 61 | 359 | Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1 |
| Q9FM79 | 4.38e-29 | 22 | 334 | 92 | 377 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| Q43062 | 1.16e-28 | 10 | 310 | 211 | 482 | Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1 |
| O81320 | 3.04e-28 | 10 | 311 | 167 | 437 | Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000049 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |