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CAZyme Information: MGYG000003904_00725

You are here: Home > Sequence: MGYG000003904_00725

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis;
CAZyme ID MGYG000003904_00725
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
621 70473.65 8.4701
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003904 2545601 MAG China Asia
Gene Location Start: 657;  End: 2522  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003904_00725.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 70 244 2.1e-27 0.48491879350348027

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 3.48e-05 34 167 6 169
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
pfam01229 Glyco_hydro_39 1.68e-04 98 266 117 301
Glycosyl hydrolases family 39.
COG3867 GanB 0.002 47 243 69 286
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 1.95e-301 9 619 9 617
QDU57372.1 5.09e-114 21 620 22 632
AVM44901.1 1.42e-69 3 569 2 584
AHF90941.1 3.82e-55 16 571 221 805
ADE82856.1 2.26e-41 17 618 26 406

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 2.59e-15 42 255 30 266
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 2.59e-15 42 255 30 266
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
5JVK_A 5.92e-14 22 242 95 343
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000299 0.998986 0.000196 0.000167 0.000166 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003904_00725.