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CAZyme Information: MGYG000003904_00852

You are here: Home > Sequence: MGYG000003904_00852

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis;
CAZyme ID MGYG000003904_00852
CAZy Family GH148
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
927 101700.22 7.4382
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003904 2545601 MAG China Asia
Gene Location Start: 1461;  End: 4244  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003904_00852.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH148 358 508 9.1e-41 0.993421052631579
GH148 563 677 2.8e-16 0.7697368421052632

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam06832 BiPBP_C 0.007 713 792 3 89
Penicillin-Binding Protein C-terminus Family. This conserved region of approximately 90 residues is found in a sub-group of bacterial Penicillin-Binding Proteins (PBPs). A variable length loop region separates this region from the transpeptidase unit (pfam00905). It is predicted by PROF to be an all beta fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM43403.1 0.0 1 927 110 1036
AVM44105.1 2.28e-244 4 927 112 1083
AVM46700.1 2.69e-224 331 927 5 601
AVM44443.1 9.68e-213 1 927 106 1076
AVM44908.1 8.56e-206 36 926 149 1068

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.984741 0.015185 0.000047 0.000021 0.000011 0.000017

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003904_00852.