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CAZyme Information: MGYG000003905_00622
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; UBA1820; UBA1820; | |||||||||||
| CAZyme ID | MGYG000003905_00622 | |||||||||||
| CAZy Family | GH171 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4322; End: 5482 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH171 | 51 | 385 | 4e-119 | 0.9971830985915493 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07075 | DUF1343 | 8.16e-177 | 52 | 385 | 1 | 362 | Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown. |
| COG3876 | YbbC | 2.45e-103 | 1 | 385 | 1 | 409 | Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown]. |
| cd01147 | HemV-2 | 0.004 | 94 | 127 | 85 | 118 | Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ARS35920.1 | 9.13e-145 | 20 | 385 | 30 | 399 |
| QAA82937.1 | 5.79e-141 | 34 | 385 | 3 | 362 |
| AOE13783.1 | 1.24e-139 | 32 | 386 | 25 | 381 |
| SDS69162.1 | 3.54e-139 | 23 | 386 | 32 | 412 |
| QKG78837.1 | 1.41e-138 | 35 | 385 | 27 | 387 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4JJA_A | 1.96e-122 | 32 | 386 | 6 | 369 | Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343] |
| 4K05_A | 7.98e-56 | 32 | 386 | 17 | 399 | Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40407 | 3.85e-86 | 42 | 385 | 48 | 414 | Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000449 | 0.984756 | 0.014036 | 0.000263 | 0.000257 | 0.000220 |