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CAZyme Information: MGYG000003908_01002

You are here: Home > Sequence: MGYG000003908_01002

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Odoribacter sp900541415
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter sp900541415
CAZyme ID MGYG000003908_01002
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
850 MGYG000003908_3|CGC1 98881.7 6.329
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003908 3732484 MAG China Asia
Gene Location Start: 179697;  End: 182249  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003908_01002.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 717 830 2.9e-20 0.8467741935483871

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 3.12e-20 716 842 3 126
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.32e-12 712 826 11 126
Substituted updates: Jan 31, 2002
smart00231 FA58C 3.59e-06 709 826 8 121
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO48862.1 6.78e-136 4 702 6 705
AZS28177.1 6.85e-132 4 705 7 707
SNV37866.1 5.44e-114 1 684 1 627
QIU94578.1 4.63e-83 14 702 15 724
QIU97332.1 1.60e-76 4 692 10 676

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3F2Z_A 8.84e-15 707 845 4 145
Crystalstructure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B [Bacteroides fragilis NCTC 9343]
2J7M_A 4.66e-08 716 845 14 147
Characterizationof a Family 32 CBM [Clostridium perfringens]
2J1A_A 4.76e-08 716 845 15 148
Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124]
2V5D_A 7.61e-07 716 845 602 735
Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0TR53 4.61e-06 716 845 632 765
O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
Q8XL08 4.61e-06 716 845 632 765
O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000006 1.000029 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003908_01002.