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CAZyme Information: MGYG000003910_02348

You are here: Home > Sequence: MGYG000003910_02348

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Dysosmobacter;
CAZyme ID MGYG000003910_02348
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 59719.32 4.672
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003910 2471901 MAG China Asia
Gene Location Start: 651;  End: 2315  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003910_02348.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 238 539 7.3e-26 0.7804054054054054

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 2.12e-17 229 538 25 303
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 2.82e-11 288 538 179 408
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 3.20e-11 286 539 74 292
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 4.04e-08 263 538 48 305
Glycosyl hydrolases family 18.
smart00636 Glyco_18 8.15e-08 288 535 79 329
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAK99492.1 4.21e-203 1 552 21 569
QUO37985.1 2.43e-200 1 553 1 552
QNL45580.1 1.79e-183 10 548 7 546
QIB69198.1 9.77e-134 2 547 6 548
QAT42616.1 6.20e-132 25 552 34 553

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q6T_A 5.55e-07 324 395 114 187
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]
5JH8_A 1.13e-06 297 395 85 179
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38535 2.13e-07 46 206 928 1085
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38536 2.76e-06 46 204 1702 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P22258 9.00e-06 25 177 31 168
Cell surface protein OS=Thermoanaerobacter kivui OX=2325 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000394 0.998705 0.000198 0.000255 0.000221 0.000193

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003910_02348.