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CAZyme Information: MGYG000003917_00797

You are here: Home > Sequence: MGYG000003917_00797

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000003917_00797
CAZy Family GH28
CAZyme Description Polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
202 22190.26 5.9322
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003917 1383819 MAG China Asia
Gene Location Start: 16;  End: 624  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003917_00797.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 1 149 6.9e-25 0.4

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.67e-32 2 197 333 529
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 5.36e-07 11 82 271 342
Probable polygalacturonase
PLN02218 PLN02218 8.96e-07 11 88 286 363
polygalacturonase ADPG
PLN03010 PLN03010 2.15e-05 11 109 251 348
polygalacturonase
PLN02155 PLN02155 7.11e-05 1 145 229 365
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54717.1 3.17e-139 1 202 330 531
QIA34431.1 8.40e-137 1 202 330 531
QUC03565.1 6.49e-96 1 201 329 529
QOL31033.1 4.30e-90 1 199 328 526
QOL34309.1 4.30e-90 1 199 328 526

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 1.49e-27 3 177 121 295
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P15922 5.27e-06 2 93 419 507
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003917_00797.