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CAZyme Information: MGYG000003920_01474

You are here: Home > Sequence: MGYG000003920_01474

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003437035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003437035
CAZyme ID MGYG000003920_01474
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
855 MGYG000003920_84|CGC1 93596.71 4.4301
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003920 2038615 MAG China Asia
Gene Location Start: 1944;  End: 4511  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003920_01474.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 19 848 1.4e-61 0.9635922330097088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.92e-05 292 622 497 796
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 1 855 1 855
AZH68834.1 0.0 4 850 13 863
QNM10672.1 1.50e-282 4 848 13 832
AGF57028.1 4.43e-237 4 848 12 845
AZS14314.1 2.53e-190 6 848 14 872

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003920_01474.