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CAZyme Information: MGYG000003921_00833
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gemmiger sp900540595 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540595 | |||||||||||
| CAZyme ID | MGYG000003921_00833 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 37103; End: 40369 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 12 | 552 | 5.5e-65 | 0.4800531914893617 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 9.92e-18 | 50 | 569 | 42 | 468 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| pfam18565 | Glyco_hydro2_C5 | 5.65e-14 | 816 | 903 | 10 | 92 | Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme. |
| PRK10150 | PRK10150 | 6.28e-14 | 42 | 508 | 26 | 422 | beta-D-glucuronidase; Provisional |
| pfam02837 | Glyco_hydro_2_N | 3.45e-09 | 53 | 215 | 34 | 169 | Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. |
| pfam00703 | Glyco_hydro_2 | 3.19e-07 | 242 | 381 | 14 | 106 | Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGH35456.1 | 0.0 | 3 | 1086 | 13 | 1096 |
| ASA20342.1 | 0.0 | 5 | 1086 | 7 | 1087 |
| AGT88372.1 | 4.34e-188 | 15 | 908 | 9 | 782 |
| ADJ49535.1 | 4.34e-188 | 15 | 908 | 9 | 782 |
| QMV17606.1 | 1.93e-162 | 7 | 934 | 48 | 875 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6HPD_A | 6.30e-129 | 42 | 935 | 56 | 836 | Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901] |
| 3GM8_A | 2.47e-29 | 3 | 857 | 1 | 743 | ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482] |
| 4YPJ_A | 5.80e-29 | 45 | 857 | 34 | 752 | ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans] |
| 7CWD_A | 5.88e-29 | 45 | 857 | 28 | 746 | ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans] |
| 6D8G_A | 2.01e-25 | 30 | 519 | 40 | 433 | D341AD367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 [Bacteroides uniformis str. 3978 T3 ii],6D8G_B D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2 [Bacteroides uniformis str. 3978 T3 ii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| T2KN75 | 2.81e-128 | 42 | 935 | 47 | 827 | Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1 |
| P77989 | 5.79e-21 | 41 | 903 | 23 | 723 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| A7LXS9 | 6.87e-21 | 45 | 912 | 66 | 843 | Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1 |
| Q48846 | 1.20e-10 | 94 | 548 | 144 | 503 | Beta-galactosidase large subunit OS=Latilactobacillus sakei OX=1599 GN=lacL PE=3 SV=1 |
| A1SWB8 | 2.76e-10 | 44 | 522 | 74 | 479 | Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000059 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |