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CAZyme Information: MGYG000003921_01617

You are here: Home > Sequence: MGYG000003921_01617

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger sp900540595
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540595
CAZyme ID MGYG000003921_01617
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
852 MGYG000003921_18|CGC1 94846.67 5.089
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003921 2675268 MAG China Asia
Gene Location Start: 13225;  End: 15783  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003921_01617.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 3 606 2e-61 0.6117021276595744

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.11e-25 1 433 10 428
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 1.73e-19 74 433 114 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 3.41e-13 2 301 11 296
beta-D-glucuronidase; Provisional
pfam00703 Glyco_hydro_2 4.08e-11 177 281 2 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02836 Glyco_hydro_2_C 1.90e-08 283 453 1 174
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIQ52150.1 1.15e-188 2 852 8 895
ASA20759.1 3.24e-173 2 852 9 897
ARS42432.1 1.70e-160 4 844 33 899
AUD01418.1 2.41e-158 4 852 24 897
QEH42551.1 3.18e-158 2 849 36 926

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 7.39e-12 81 442 145 512
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A0KQH4 8.58e-11 10 459 68 508
Beta-galactosidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=lacZ PE=3 SV=1
P77989 8.66e-10 46 432 45 410
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
Q02603 3.07e-09 83 411 142 467
Beta-galactosidase large subunit OS=Leuconostoc lactis OX=1246 GN=lacL PE=1 SV=1
P26257 7.60e-09 208 451 191 435
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999031 0.000922 0.000060 0.000003 0.000002 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003921_01617.