CAZyme Information: MGYG000003926_00630

Basic Information

• Species: Rikenella microfusus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Rikenella; Rikenella microfusus
• CAZyme ID: MGYG000003926_00630
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
722		81298.51	6.3576

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003926	2402156	MAG	China	Asia

• Gene Location: Start: 719; End: 2887 Strand: +

Full Sequence      

MFKPLFSLLALAAATVQTLPAQQIYLSPTGDDANPGTEAEPVYSLTAARDLIRRLPAGGD
TVTVWIAPGTYRMTEPLILDSTDVRPVVFRGRTAEKPVFAGSIEVTGWTPWRDGIWRTKL
PETLYFEQFYVNGRRAVRARTPNTGWHYVKGSRETVFDKGTGRAPQYAVQRIDVAPDELA
SLRRMSREELRHATALFYHKWDVTRKPIDHAVPDSGRFFISGEGMKPWNPITGGSRYVLD
NYLGALDAPGEWYLSPDGWLYYMPREDESMAAAECYAPTLSRLLVFAGSPDRPVTGKEFR
HIAFRTSAYTMPLKGNEPMQAAAAIPAAIEADYASRVVFADCEVTQTGGYAFWLRRECFD
NRIERCLIEDLGAGGIKIGETEIRMDGRPVTARNTVDNNIIRHGGYWFPCAVGVAVFQAA
DNRVTHNEIADMRYSGISVGWKWGYNDQKTWITRMAEDGTMQYAEVLVESPAVSNTIAFN
HVHHIGWGEVWGMGAVYTLGESPGTVVSNNVIHDIYSYDYGGWGLYTDEGSTGIVMENNL
VYRCKSGGFHQHYGKENVIRNNIFALAYQNQLQFTRVEPHRSFTFERNIVLSDRGTLLAG
SGSWRDANIAMDRNDYWDIRADTALRFCGLPFREWRRIRDAHSVVADPMFRNPEAGDFTF
RSLKTARRIGFVPFDYTQAGVYGSEEWKERARLDETVIEAFAAAVEVREAYYKAGAPERG
EQ

Enzyme Prediction     

No EC number prediction in MGYG000003926_00630.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	23	542	5.4e-100	0.9905123339658444

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	1.17e-13	358	562	8	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	9.33e-09	413	603	2	149	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	2.39e-05	494	564	1	64	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	1.52e-04	394	564	30	172	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SCM58138.1	2.98e-186	13	701	12	697
QDT83929.1	2.37e-173	41	692	36	668
QDT19841.1	1.32e-172	41	692	36	668
QDV55623.1	3.44e-170	11	691	34	670
AEL24383.1	4.99e-170	24	705	38	707

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	8.02e-32	19	508	22	544	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000368	0.998873	0.000197	0.000185	0.000174	0.000172

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003926_00630.