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CAZyme Information: MGYG000003928_01065

You are here: Home > Sequence: MGYG000003928_01065

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000003928_01065
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
683 74469.22 4.5644
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003928 2142159 MAG United Kingdom Europe
Gene Location Start: 11187;  End: 13238  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003928_01065.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 547 666 4.6e-16 0.5904255319148937

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 2.55e-13 569 653 7 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 1.23e-07 582 665 759 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
COG5279 CYK3 3.49e-07 336 508 162 364
Cytokinesis protein 3, contains TGc (transglutaminase/protease-like) domain [Cell cycle control, cell division, chromosome partitioning].
pfam14200 RicinB_lectin_2 1.64e-06 612 669 2 58
Ricin-type beta-trefoil lectin domain-like.
NF035930 lectin_2 1.36e-05 582 664 123 197
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH69735.1 5.42e-182 187 635 114 559
ADQ03654.1 3.60e-08 331 446 1103 1232
ADQ05809.1 4.66e-08 331 446 955 1084
ADL41439.1 4.73e-08 320 446 1097 1232
BCS80083.1 4.73e-08 331 446 1103 1232

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999383 0.000574 0.000004 0.000001 0.000001 0.000011

TMHMM  Annotations      download full data without filtering help

start end
48 70