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CAZyme Information: MGYG000003936_00545

You are here: Home > Sequence: MGYG000003936_00545

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004;
CAZyme ID MGYG000003936_00545
CAZy Family GH59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1005 111967.44 4.9422
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003936 1259772 MAG United Kingdom Europe
Gene Location Start: 868;  End: 3885  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH59 1 662 2.8e-144 0.9572107765451664

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02057 Glyco_hydro_59 1.88e-78 2 321 18 291
Glycosyl hydrolase family 59.
COG5492 YjdB 1.19e-11 762 891 151 290
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 5.50e-11 796 868 1 72
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
COG5520 XynC 3.69e-07 70 230 110 270
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam06439 DUF1080 9.89e-07 505 662 17 182
Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMW11854.1 2.69e-237 1 807 72 929
AZM74018.1 8.39e-235 1 784 72 903
QLH25411.1 1.84e-234 1 807 72 929
QKW59509.1 3.33e-234 1 784 72 903
QUW95523.1 2.90e-233 1 784 75 906

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5SNX7 6.82e-17 6 573 53 561
Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
Q0VA39 1.47e-15 13 573 73 576
Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1
Q498K0 7.39e-12 13 573 73 575
Galactocerebrosidase OS=Xenopus laevis OX=8355 GN=galc PE=2 SV=2
P85991 1.57e-06 778 867 160 249
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003936_00545.